DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir100a and Ir7b

DIOPT Version :9

Sequence 1:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster


Alignment Length:685 Identity:117/685 - (17%)
Similarity:231/685 - (33%) Gaps:165/685 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALVGGTLGQANNTDHKQVLTSIVKQLEGG------LELHLRTSEDGGNDLVQFLMQEKSSIIISA 69
            :||..|:..:::.|..:.|..:|...|.|      :..|..:...||:      ::|....::..
  Fly    12 SLVASTMESSSDWDLAEALAQVVANSEMGRFKTLYIYTHTNSQSTGGH------LEELLDQVLMI 70

  Fly    70 KQEEVPSRAKIMRHHFFIFDGVHQMQEIRTSLFNTDGFYILALENNTIEDDVLLMEFAADVWLQH 134
            ....:.:|..:::........||.:..:...|.:....|........:...::.|....|.:.:.
  Fly    71 VPNNLQARRLLLQQSMEYKPYVHAVLALVDGLPSLSAIYARIRATQDLSHTLIYMSMPTDAYGEE 135

  Fly   135 GHSRIYYV-QLSKKSV-LLFNPFLQRLVVVQ-------------DSKTYSRIYKDLEGYHLRIYI 184
            ..:.:.:: :||..:| ::..|....:::|.             .:...:|.....:.:..:.| 
  Fly   136 MQATLRFLWRLSVLNVGVVLRPPGDHILMVSYFPFSALHGCQVISANVVNRYQVGTKRWASQDY- 199

  Fly   185 FDSVYSSVIG------------------DGENKVLSVTGADAKLAKTVARQLNFTADFVWPDDEF 231
            |.|...:..|                  ||....:.:.||   |.:.:|..||||....|.:.|.
  Fly   200 FPSKLGNFYGCLLTCATWEDMPYLVWRPDGSGSFVGIEGA---LLQFMAENLNFTVGLYWMNKEE 261

  Fly   232 FGGRLANGEYSGGVGRAHRG-EVDIIFAGFFIKDYLTTHIQFSAAVY--MDELCLYV------KK 287
            .   ||..:.||.:.....| ..|....||..|....:.|.:|.:.|  |..:.|..      ..
  Fly   262 V---LATFDESGRIFDEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMSHIMLVTNLQSAYSA 323

  Fly   288 AQRIPQSILPLFAVHMDVWLCFLLVGLLGALVWLILRAVN-------------LILGIEGVPDGS 339
            .:::.....||      :|....||.:|..|:.::|....             |:|.:.|..:  
  Fly   324 YEKLSFPFTPL------LWRAIGLVLILACLLLMLLVRWRHHHELPRNPYYELLVLTMGGNLE-- 380

  Fly   340 RATRISYFGAARRIFVDTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALLESSLATVYIRP 404
                            |.||      ..|||         :.|.|::.:|        ||:.:|.
  Fly   381 ----------------DRWV------PQRFP---------SRLVLLTWLF--------ATLVLRS 406

  Fly   405 LYYRDVNTLRELDESGQPIYIKHPAFKDDLFYGHNSEVYRRLDAKMMLVAEGEERLIEMVSKRG- 468
            .|...:..|...|....|     |....::...|.:.....::...:|.:..|.|..::|...| 
  Fly   407 GYQSGMYQLLRQDTQRNP-----PQTISEVLAQHFTIQLAEVNEARILASLPELRPEQLVYLEGS 466

  Fly   469 ---GFAGVTRSASLQ-----LSDIRYV--------MTKKVHKIPECPKNYHIAYVLPRPSPYLEE 517
               .|..:.:.:...     |:...|.        |::::|.:.|......:|:.:.|.|..:..
  Fly   467 ELQSFPALAQQSGSSARVAILTPYEYFGYFRKVHPMSRRLHLVRERIYTQQLAFYVRRHSHLVGV 531

  Fly   518 VNRIVLRLVAGGIVGLWTGE---AKERAKWSIQRFPE-------------YLAELDVG------R 560
            :|:.:......|.:..||.:   |.:....|:.|...             .|:|.:..      |
  Fly   532 LNKQIQHAHTHGFLEHWTRQYVSAVDEKDESVARIASTSYSTLDGIDGDPSLSESEEDQQVAPVR 596

  Fly   561 WKVLTLSDVQLAFYALTIGCLLSAIVCMAEILLGR 595
            ..||::.::...|:.:....|.:.:|.:.|:||.|
  Fly   597 QNVLSMRELAALFWLILWANLGAVVVFVLELLLPR 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 13/45 (29%)
Lig_chan <439..580 CDD:278489 27/179 (15%)
Ir7bNP_572410.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.