DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acf and ITC1

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_011382.1 Gene:ITC1 / 852744 SGDID:S000003101 Length:1264 Species:Saccharomyces cerevisiae


Alignment Length:1440 Identity:273/1440 - (18%)
Similarity:469/1440 - (32%) Gaps:495/1440 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NDQVFCCYITKRIFRDYEHYFRHVMVINSTVWQCEATGKENLTYEEAVKSERAARKKME-QFKQS 87
            |.||:....|...|..||.:...........:.||.||...||:.:|:.||....|.:| :|...
Yeast    22 NVQVWHIEETGEWFSSYEEFLERFDFYTRHHFTCEITGTSCLTFFQALDSEETQFKYVEDRFPLK 86

  Fly    88 LRAPVLLVVEHAQQSAVNTLNMIVAKF---LRKRYFIGEEVSVQAKKNATYTVLGVKLDKNMPEP 149
            ||.||...:..   :.:..|:.:|.|.   .:..:|.||.|.::.:|:::.|  .....::.|:|
Yeast    87 LREPVARFLHF---NGIRRLDALVEKVYARFKNDFFPGEVVYLRKQKDSSTT--SSNSQQSTPQP 146

  Fly   150 -----LNGI-------YEDTDNLVYR--------LRPNKGDPSAELDLPFR-------------- 180
                 :|.:       |:.....|.:        :.|.    |.|:.:|..              
Yeast   147 DDMVEINSVGNPGLPQYQYQRRYVIKEKVQFNATINPE----SREIVMPAHTKYMLIEEAASSNK 207

  Fly   181 -------QLRRSRMEFNLENLSMFIKSNVSRVD-----------------GLLRPKPEAYKQYVT 221
                   |:.|.|..|....:..|.|..:.|..                 ||....|:...:|..
Yeast   208 SFIVDQGQIYRDRSTFTKHLIKCFFKITLQRASSKMGAPWCVKPEYLAMYGLTMEWPKDMLKYKE 272

  Fly   222 DPGVNFSTIFIGKMPRYSPAKIKKPDGKKQSTLNKYIVAGEATAA---------KSKAKA----- 272
            |..|      :.:  |.:.|.:..|:.:|....:|  .:|::..:         |.|.|.     
Yeast   273 DEPV------VAR--RSNSANVSSPESEKNKRQSK--SSGKSNTSNDASNKKETKKKRKPTEVND 327

  Fly   273 ---------KSDAKSLAEELERVKREKEAKLIELEKQKAEKKAQLIERVENECNLLLQKTDDLER 328
                     |...:::..|....||:|||        ..|...:.:|.|....|...|.......
Yeast   328 SENNSSEEDKKKGQNVTSETHSKKRKKEA--------NEEPNTENVESVPTPANAEPQAVTITSI 384

  Fly   329 TDQKVLPRYRQIVTLLP------EHL----LGDAFMMR------------EFMHTYTGLLSGIEV 371
            .|...|| |:....:.|      |.|    ||...:.|            :|::|:...:.    
Yeast   385 MDDLALP-YQHPPNIFPNLTYYNEKLECISLGSTKLSRPFDSFGKLLQAYQFLNTFGSKIC---- 444

  Fly   372 FRQNLSFYEMTRALTAREIAGPL---SDILLVLLGTVFDLQKEEE-EECAVTYLDRAAQTQEPYW 432
                ||.:.:.:.:|:.:...|.   .:::||.:.|  ...||:| |...:...::|..|.|   
Yeast   445 ----LSHFSLDQFITSLKCTDPYELKGEVVLVNIRT--QTSKEQEIENNGLPMKNKAETTTE--- 500

  Fly   433 SMAQAAKSHLYAKRHFSFKVNELPLDALTLSEVLRLHLLGSGAFVNEKAERWRVMYRNGYSSK-- 495
                              :.:|.|.|            ....:|:.:     .:|.||  |.|  
Yeast   501 ------------------EDSENPSD------------WQRNSFIRD-----MIMKRN--SDKVE 528

  Fly   496 -----EDPGLELRLEHSHILRILKNHSVYQLKFKDIMLLIRCLMSQIMTYSGTI--NLI------ 547
                 :||..:..|::.       ||:...|..:....|:|..:::...:|..:  |.|      
Yeast   529 YKIVHDDPASDDILDNI-------NHNGSALLIEVFTALLRLFINEEGDWSCIVVENWIIDDKGV 586

  Fly   548 -----EERMEQTAKARQDLRALVVGENKRLAAVEINRKKLTQMHHLEVNGVEPEKREALVEKLKK 607
                 :||.|..||.:::.....:.:.:::.    |.|...:.:..||......|.|...|...|
Yeast   587 LMERKDERGEGEAKQKRNAHGYFLQDKEKID----NLKDTLKENATEVQKESDAKNETNSESDSK 647

  Fly   608 SIAELHAQSDQQHRKHELQMLKLHSQLFNFLVYLGMDRCYRKYYVLESMPGIFVE--HSP---DS 667
            |      .||.:.|..:|:.. |:.:..|::..| ..|.:...|.|..:.|:..:  |.|   :.
Yeast   648 S------DSDSEERDPKLEKC-LNYRNVNWIERL-TKRQFNNSYWLIILLGVLEDCRHLPMYTEF 704

  Fly   668 LDTCLEQPITNKSQIEIRQQSALPKNRKDLRVYLLKLYGDDEKKTKKKAKHSLENKENQEHRLNG 732
            :|:.:|:.|  ...|...|   |||..  .|.:..||              |..:|.|....|  
Yeast   705 IDSFIEKII--PKDISATQ---LPKQL--WRNFCRKL--------------SFSDKVNALWIL-- 746

  Fly   733 SAEPMDVESD-SPE--APTHFELLMCSGDKRS------------CIVHDSRNGQRQRWAYIYKAE 782
                :|:.|. ||:  |.....:.:| |..||            ..|..:..|..|  |...|..
Yeast   747 ----VDLVSHFSPDIKAAVDDSMELC-GQIRSERFKVARELKTEAAVLSNLQGDLQ--AIQEKLN 804

  Fly   783 EIDELIKALNPNGLREYELLQELSVLRSLIEQHAKTCPVDLLSLENETMRKKFMAAMESETNRKY 847
            :.||...:.:....::              :..:.:.|:||:.:|.   ::|.:...:.:.....
Yeast   805 KTDENTPSADGADKKD--------------DSESNSEPIDLIIIEK---KQKLIEEQDKKVQALQ 852

  Fly   848 GEANFGLPNGTDLNEVMRLHLVDRIIQFENDIYTGDLGRLKVKDMEKWRSDLLGGNYDAQCKLQW 912
            .:.||                      .:|.::..||.|||...::::.:.....:::.....|:
Yeast   853 SDKNF----------------------LDNCLFENDLQRLKPLGLDRYGNRYFWLDHNGVPFPQY 895

  Fly   913 GPGGKLEDEAGSDNESHETHEEDDGALLGKYARKPYRDPGMYLAASADTKPLPDSDDEE----DQ 973
             |.|.  :|....|.|...|   .|.||.:..:          |:||  |...:..||:    .:
Yeast   896 -PAGM--NETPKSNNSLSYH---SGRLLIQGPK----------ASSA--KFFLNVSDEQLSNWQK 942

  Fly   974 HTNAVSIPIAVHNMASALLQVEQAIGKRFLKEPYGMKKWDPKQEALKLACDSRLHQW-----EVS 1033
            ..|:..|..|.                   :|.:|:.|           ..|..:.:     ||.
Yeast   943 IRNSEGISEAT-------------------REVFGISK-----------TSSGSYNYVENGIEVE 977

  Fly  1034 LMESTSFAQVFLHLNILHDCIQWRRSTNKSLCKVCRRGSDPEKMLLCDECNAGTHMFCLKPKLRS 1098
            |::|.......:.|..:...|.               ...|.::||                   
Yeast   978 LLDSNDRVNPLIELTPIQKKIM---------------DETPSRLLL------------------- 1008

  Fly  1099 VPPGNWYCNDCVKSLG-----LSN-GQNEKDKKQA------------------------TKKKRK 1133
             .|..|||.|.::.|.     |.| |:.|.|..:.                        ||.:.|
Yeast  1009 -SPDQWYCIDKLEDLSRIMDWLDNWGRKEHDLLRQIRPIMERIKSSLSLRDHALSLTAFTKNEEK 1072

  Fly  1134 FIVEEEDDEATDEE------EEEKKDDDMTDE-----DAEHENEK-HDEDVE---------DDES 1177
            .:.|.|::|.|:.|      :.:.|:..:..|     |||.:.|. .||.:|         ||.|
Yeast  1073 LLKELENNEFTENELNVDSMDVDDKNSGVKSEVDVQVDAEEKREAVIDEKLEVIADELMKLDDSS 1137

  Fly  1178 VT----------------------STPSSSRVNGRIL---RRPRTRPTSRRLTSKEIE------- 1210
            .|                      |..:|.|...|||   .|.||:.:.....:|:||       
Yeast  1138 KTRNVLNRIQELEDQRDELLEQKKSIINSQRPGARILARSERKRTKISRGNKVNKQIEILTDLVN 1202

  Fly  1211 -EH--AQEDV 1217
             .|  |.|||
Yeast  1203 YRHFKAMEDV 1212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503 28/102 (27%)
DDT 346..411 CDD:214726 14/83 (17%)
WHIM1 505..554 CDD:292246 11/61 (18%)
WHIM2 637..666 CDD:292247 7/33 (21%)
WHIM3 775..813 CDD:292248 4/37 (11%)
PHD_RSF1 1064..1109 CDD:277018 7/44 (16%)
PHD 1244..1284 CDD:214584
Bromo_Acf1_like 1349..1463 CDD:99936
ITC1NP_011382.1 WAC_Acf1_DNA_bd 24..124 CDD:402251 28/102 (27%)
DDT 423..483 CDD:214726 11/69 (16%)
WSD 869..952 CDD:406128 21/100 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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