DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acf and brd4

DIOPT Version :10

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:XP_073799304.1 Gene:brd4 / 570531 ZFINID:ZDB-GENE-030131-267 Length:1521 Species:Danio rerio


Alignment Length:142 Identity:46/142 - (32%)
Similarity:73/142 - (51%) Gaps:7/142 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1321 SIDKTARPSNGNNNNNNNNSSVNNNNHRRSGRRTNEHMPLNSAALYDLLEQIMKHKAAWPFLRPV 1385
            |.....:||:...::.|.|.. ..:|..|..|:||:...|    |..:|:.:.||:.||||..||
Zfish    90 SSSSQGQPSSQAPSSFNPNPP-ETSNPTRPKRQTNQLQYL----LKVVLKSLWKHQFAWPFHAPV 149

  Fly  1386 --LTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQ 1448
              :...:|||::|||.|||:..||.:|....|...:|.:.|...:|.||.:||..|::|......
Zfish   150 DAVKLNLPDYYKIIKNPMDMGTIKKRLESAFYTSAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 214

  Fly  1449 LERFVIDRCRDM 1460
            ||:..:.:..:|
Zfish   215 LEKVFLTKISEM 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:463140
DDT 346..411 CDD:214726
WSD 641..>666 CDD:464775
WSD <774..805 CDD:464775
PHD_RSF1 1064..1109 CDD:277018
PHD 1244..1284 CDD:214584
Bromo_Acf1_like 1349..1463 CDD:99936 40/114 (35%)
brd4XP_073799304.1 None
Blue background indicates that the domain is not in the aligned region.

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