DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acf and ep300b

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:XP_009297682.1 Gene:ep300b / 565612 ZFINID:ZDB-GENE-080403-15 Length:2646 Species:Danio rerio


Alignment Length:1058 Identity:201/1058 - (18%)
Similarity:328/1058 - (31%) Gaps:382/1058 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 EPEKREALVEKLKKSIAELHAQSDQQHRKHELQMLKLHSQLFNFLVYLGMDRCYRKYYVLESM-- 656
            :||||:.:.::|   :..|||     |:.|..:......:..|      :..|.....||..|  
Zfish   302 DPEKRKLIQQQL---VLLLHA-----HKCHRREQANGEVRQCN------LPHCRTMKNVLNHMTH 352

  Fly   657 ----PGIFVEHSPDSLDTCLEQPITNKSQIEIRQQSALPKN--RKDLRVYL-LKLYGDDEKKTKK 714
                ....|.|...|                 ||..:..||  |.|..|.| ||..||       
Zfish   353 CQAGKSCQVAHCASS-----------------RQIISHWKNCTRHDCPVCLPLKSAGD------- 393

  Fly   715 KAKHSLENKENQEHRLNGSAEPM------DVESDSPEAPTHFELLMCSGDKRSCIVHDSRNGQRQ 773
                    |.||:..|.|:...|      .:....|.||.                         
Zfish   394 --------KRNQQSLLGGAGMAMGGPLGGSLPGGQPSAPN------------------------- 425

  Fly   774 RWAYIYKAEEIDELIKALNPNGL-REYELL-------------QELSV-----LRSL-------- 811
                |....:||       |:.: |.|..|             |:.||     :|||        
Zfish   426 ----INPPSQID-------PSSIERAYAALGLTYQGNQASNQNQQTSVPGQPGMRSLNNMAGGNS 479

  Fly   812 -----------IEQHAKTCPVDLLSLENETMRKKFMAAMESETNRKYGEANFGL------PNG-- 857
                       ..||....|        :.|..:.|.| :|..|...|..|.|.      |:.  
Zfish   480 MGVNGGVGAPMSNQHPGMLP--------DGMLHRNMTA-QSLMNDSSGVGNMGSAATATPPSAGM 535

  Fly   858 -----TDLNEVMRLHLVDRIIQFENDIY-TGDLGRLKVKDMEK---WRSDLLGGNYD-AQCKLQW 912
                 .|:.:.:|.|||.:::|   .|: |.|...||.:.||.   :...:.|..|: |..:.::
Zfish   536 RKSWHEDITQDLRNHLVHKLVQ---AIFPTPDPAALKDRRMENLVAYARKVEGDMYESANSRAEY 597

  Fly   913 -----GPGGKLEDEAGSDNESHETH-EEDDGALLGKYARKPYRDPGMYLAASADTKPLPDSDDEE 971
                 ....|::.|.   .|...|. ::.||         |:.||.:..|    |.|        
Zfish   598 YHLLAEKIYKIQKEL---EEKRRTRLQKQDG---------PHSDPSLVQA----TGP-------- 638

  Fly   972 DQHTNAVSIPIAVHNMASALLQVEQAIGKRFLKEPYGMKKWDPKQEALKLACDSRLHQWEVSLME 1036
            .|..|.:..|..:.:..:.:.|..| :|   :::|.|.:...|      |...:.|:|  :|:..
Zfish   639 SQMVNRMQNPAGMPHSLNGMNQFGQ-VG---MQQPMGQRATPP------LPMGANLNQ--MSMQG 691

  Fly  1037 STSFAQVFLHLNI--LHDCIQWRRSTNK---------SLCKVCRRGSDPEKMLLCDEC------- 1083
            :...||.    |:  |.:.....:.|..         .|.:...:|:.|:..:.....       
Zfish   692 TPRMAQP----NVPQLQNQYMQNQFTGTGAGLGQGAVGLNQPAGQGAMPQNQMPTPPSLSVHSPV 752

  Fly  1084 ----------------------------NAGTHMFCLKPKLR-----------------SVP--- 1100
                                        ..|.|..|  |.||                 ..|   
Zfish   753 AQSQSSVPVSGAAAGPQGPPSNHPPPAPQPGLHTHC--PPLRQNSPSPARSLTPTPAPHQTPPQL 815

  Fly  1101 PGNW----YCNDCVKSLGLSNGQNEKDKKQATKKKRKFIVEEEDDEATDEEEEEKKDDDMTDEDA 1161
            |||.    :..:...::.....|.....:....:|...:.::..........:......:..::|
Zfish   816 PGNQTPQPHTPNSSTTMAPPASQLPPMAQGVASEKSSQLQQQSHGGGATGGPQTGLASSVPSQNA 880

  Fly  1162 E------HE--NEKHDEDVEDDESVTSTPSSSRVNGRILRRPRTRPTSRRLTSK-EIEEHAQEDV 1217
            .      |.  ::|....|:...|..::.||:..:.::.....|.|    |.|| |:::..:|:.
Zfish   881 HGLCTHPHSPLSQKSSATVDGQASTPASVSSADPSSQLTSSEPTAP----LDSKTEVKQQDEEEE 941

  Fly  1218 DSGDVSDDASLTAGEDTIEDESDEEKVCQKCFYDGGEIKCVQCRLFFHLECVHLKRPPRTDFVCK 1282
            :..:..|.||........|.:|:|:.          |||               |..|..| .||
Zfish   942 NENETEDKASGKMAAMQTEIKSEEKP----------EIK---------------KEEPAGD-ECK 980

  Fly  1283 TCKPMPQRPRRRHSNMNGDHDRDEE---EPKAKRPRNSLRLSIDKTARPSNGNNNNNNNNSSVNN 1344
            | :||         ..:...|:..|   |||.:....:                     ||:..|
Zfish   981 T-EPM---------ETSTAEDKKPEVKTEPKEEEVAGA---------------------NSTPAN 1014

  Fly  1345 NNHRRSGRRTNEHMPLNSAALYDLLEQIMKHKAAWPFLRPV-----------LTSEVP--DYHQI 1396
            ...::...:.:|   |..|.:..|.....:...:.||.:||           .||...  ||..|
Zfish  1015 TQSKKKEFKPDE---LRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPVRIRTSNKTNLDYFDI 1076

  Fly  1397 IKTPMDLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFV-------- 1453
            :|.|:||:.||.||:.|.||...:.:.|:.|:|.|..|||.:.:.:|....:|....        
Zfish  1077 VKNPIDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKYCSKLAEVFEQEIDPVM 1141

  Fly  1454 --IDRCRDMQLPFRPSDM 1469
              :..|...:|.|.|..:
Zfish  1142 QELGYCCGRKLEFSPQTL 1159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503
DDT 346..411 CDD:214726
WHIM1 505..554 CDD:292246
WHIM2 637..666 CDD:292247 6/34 (18%)
WHIM3 775..813 CDD:292248 13/75 (17%)
PHD_RSF1 1064..1109 CDD:277018 13/103 (13%)
PHD 1244..1284 CDD:214584 8/39 (21%)
Bromo_Acf1_like 1349..1463 CDD:99936 34/136 (25%)
ep300bXP_009297682.1 zf-TAZ 318..385 CDD:280324 18/94 (19%)
KIX 534..614 CDD:280354 18/85 (21%)
Bromo_cbp_like 1024..1142 CDD:99927 33/120 (28%)
RING_CBP-p300 1154..1236 CDD:276805 2/6 (33%)
PHD_SF 1237..1271 CDD:304600
HAT_KAT11 1300..1607 CDD:285432
ZZ_CBP 1663..1703 CDD:239077
ZnF_TAZ 1724..1802 CDD:214717
Creb_binding <2164..2231 CDD:286163
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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