DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acf and Crebbp

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:XP_038942595.1 Gene:Crebbp / 54244 RGDID:2401 Length:2454 Species:Rattus norvegicus


Alignment Length:277 Identity:63/277 - (22%)
Similarity:103/277 - (37%) Gaps:72/277 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1169 DEDVEDDESVTSTPSSSRVNGRILRRPRTRPTSRRLTSKEIEEHAQEDVDSGDVSDDASLTAGED 1233
            |..|....||||..:||:..|         |....|..|       .:|.:.|...|.:.:.||.
  Rat   970 DNRVPTPSSVTSAETSSQQPG---------PDVPMLEMK-------TEVQTDDAEPDPAESKGEP 1018

  Fly  1234 TIEDESDEEKVCQKCFYDGGEIKCVQCRLFFHLECVHLKRPPRTDFVCKTCKPMPQRPRRRHSNM 1298
            ..|       :.::......::|                  ..||...:..:||           
  Rat  1019 RSE-------MMEEDLQGSSQVK------------------EETDTTEQKSEPM----------- 1047

  Fly  1299 NGDHDRDEEEPKAKRPRNSLRLSIDKTARPSNGNNNNNNNNSSVNNNNHRRSGRRTNEHMPLNSA 1363
                :.:|::|:.|           ..|:....|:.|...:.|.:.:..|:...:..|   |..|
  Rat  1048 ----EVEEKKPEVK-----------VEAKEEEENSANGTASQSTSPSQPRKKIFKPEE---LRQA 1094

  Fly  1364 ALYDLLEQIMKHKAAWPFLRPV--LTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELLSDIQ 1426
            .:..|.....:...:.||.:||  ....:|||..|:|.||||:.||.||:.|.||...:.:.|:.
  Rat  1095 LMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVW 1159

  Fly  1427 LVFRNCDLYNVEGNEIY 1443
            |:|.|..|||.:.:.:|
  Rat  1160 LMFNNAWLYNRKTSRVY 1176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503
DDT 346..411 CDD:214726
WHIM1 505..554 CDD:292246
WHIM2 637..666 CDD:292247
WHIM3 775..813 CDD:292248
PHD_RSF1 1064..1109 CDD:277018
PHD 1244..1284 CDD:214584 3/39 (8%)
Bromo_Acf1_like 1349..1463 CDD:99936 32/97 (33%)
CrebbpXP_038942595.1 zf-TAZ 362..429 CDD:396624
KIX 586..666 CDD:366953
PHA03247 <682..1098 CDD:223021 34/197 (17%)
COG5076 942..>1194 CDD:227408 63/277 (23%)
Bromo_cbp_like 1088..1195 CDD:99927 32/92 (35%)
RING_CBP-p300 1207..1289 CDD:276805
PHD_CBP_p300 1291..1322 CDD:277032
HAT_KAT11 1353..1660 CDD:400497
ZZ_CBP 1716..1756 CDD:239077
zf-TAZ 1783..1851 CDD:396624
Med15 1971..>2425 CDD:312941
Creb_binding 2045..2123 CDD:401102
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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