DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acf and baz2a

DIOPT Version :10

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_001307060.1 Gene:baz2a / 450079 ZFINID:ZDB-GENE-041010-202 Length:2460 Species:Danio rerio


Alignment Length:1664 Identity:340/1664 - (20%)
Similarity:550/1664 - (33%) Gaps:684/1664 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KENLTYEEAVKSERAARKKMEQFKQSLRAPVLLVVEHAQQSAVNTLNMIVAKFLRKRYFIGEEVS 126
            ||:||.||        ::|:.:.|:.::..                    |:..||.....:::.
Zfish  1202 KEDLTEEE--------KEKLAKIKKKMKRK--------------------ARMKRKEDAKNKKMR 1238

  Fly   127 VQAKKNATYTVLGVKLDKNMPEPLNGIYEDTDNLVYRLRPNKGDPSAELDLPFRQLRRSRMEFNL 191
            ::.:|        .||:|:..:.|       ||         ||    |.|||.|..        
Zfish  1239 LEKRK--------AKLEKSKEQGL-------DN---------GD----LSLPFSQSS-------- 1267

  Fly   192 ENLSMFIKSNVSRVDGLLRPKPEAYKQYVTDPGVNFSTIFIGKMPRYSPAKIKKPDGKKQSTLNK 256
                   :|.:|..:|   ||....::.|..|.                |:...|:         
Zfish  1268 -------ESTLSASEG---PKKPGRRRKVVVPA----------------AETFDPE--------- 1297

  Fly   257 YIVAGEATAAKSKAKAKSDAKSLAEELERVKREKEAKLIELEKQKAEKKAQLIERVE--NECNLL 319
                 :|:..|:.|:|:|.||:||:  .:.:.|.||:.....|:.||::||...|:|  .:..:|
Zfish  1298 -----QASPIKTVARARSKAKALAK--AQAQAEAEARAALAAKRAAERRAQAQRRMEERKKQQML 1355

  Fly   320 LQK----TDDLERTDQKVLPRYRQIVTLLPEHLLGDAF----MMREFMHTYTGLLSGIEVFRQNL 376
            |::    .:|:...|...||...:|..|   .|.|.||    .:.||:|.| |.:.|::|.:...
Zfish  1356 LEEMKKPAEDMCLPDHTPLPPLTRIPGL---KLSGLAFSNCLRVVEFLHGY-GKILGLQVPKDIP 1416

  Fly   377 SFYEMTRALTAREIA-GPLSDILLVLLGTVFDLQKEEEEECAVTYLDRAAQTQEPYWSMAQAAKS 440
            |...:...|...|.: |.|.|:|:.|:            |.|:         .:|      ...|
Zfish  1417 SLITLQEGLLGMEKSQGELLDLLIKLV------------ESAL---------HDP------GLPS 1454

  Fly   441 HLYAKRHFSFKVNELPLDALTLSEVLRLHLLGSGAFVNEKAERWRVMYRNGYSSKEDPGLELRLE 505
            :..:.:....|:.:|.|:..|:|||||:.|                         |..|.|:.:.
Zfish  1455 YYQSVKILGEKLVDLELNHSTVSEVLRVFL-------------------------EAHGFEMEVC 1494

  Fly   506 HSHILRILKNHSVYQLKFKDIMLLIRCLMSQIMTYSGTINL-IEERMEQTAKARQD--------- 560
            :|     |:..|...|| .|:...|...:.:.:..|..:.. |:..:|..|..|::         
Zfish  1495 NS-----LRTKSFQTLK-PDVKASILAFVVEELNASNIVTREIDNTLENMATYRKNKWIIEGKLR 1553

  Fly   561 -LRA------------LVVGENKRLAAVEI-NRKKLTQMHHLEVNGVEPEKREALVEKLKK---- 607
             |:|            ||..|.:|.|.|.: ..:.:.:...||.......|.|....:::.    
Zfish  1554 KLKAALVRKTGRPEEELVFEERRRSARVGVAEEESIEESCVLERGSRRKAKEEPKHTEIESPNTC 1618

  Fly   608 SIAELHAQSDQQHRKHELQMLKLHSQLFNF-LVYLGMDRCYRKYYVLESMPGIFVEHSPDSLD-- 669
            |:|||..|.|:..::......||.....:. .|.||.||..|:|.:|..|..|.||.:.|.|.  
Zfish  1619 SVAELERQIDKLTKRQVFFRKKLQQSSHSMRAVSLGQDRYRRRYLLLPYMGCILVEGAEDILASG 1683

  Fly   670 --TCLEQPIT----------------------------NKSQIEIRQQSALP------------- 691
              |..::|:|                            ..|::.:....|||             
Zfish  1684 EVTVTDEPVTYVKVITPAKAEVKAEPPLSPGFCTSSSPQGSRLSLTDLDALPGEASLMSTPRGRG 1748

  Fly   692 ----------------KNRK-------------------DLRVYLLKL----------------- 704
                            |||:                   ||.:..|:.                 
Zfish  1749 RPRKIKPEVELHLRTAKNRRRRRSSRSAGEDSGLSSPLQDLPLPALQASVKQPQDDEADASAPIV 1813

  Fly   705 -----YGDDEKKTKKKAKHSLENKEN----------QEHRLNGSAEPMDVESDSPEAPTHFELLM 754
                 .|:|..:.:...:...|.:..          .|..|:...|.....:|...||.:.:||.
Zfish  1814 ASGAGQGEDNSQPEDSMREQAEKRGQWFNLLPKEPCDETSLSQPCENTPASADGAPAPVNGDLLT 1878

  Fly   755 C--------------------------------------------SGDKRSCIVHDSRNGQRQR- 774
            .                                            ||..|   || ||.|..:| 
Zfish  1879 ADPAQPLKQEVTTEALPLTFPLPVSVPVPLSSSAPAPRGRRRRRGSGPSR---VH-SRTGTAKRR 1939

  Fly   775 -------------------------------WAYIYKAEEIDELIKALNPNGLREYELLQELSVL 808
                                           |.:|.:.||:..::.||:|.|:||..|.:.||  
Zfish  1940 GRPPSKLFQEVQLKYFTQLVVRPIPLEMVKGWWWIREPEELTAILSALHPRGIREKMLHKHLS-- 2002

  Fly   809 RSLIEQHAKTC------PVDLLSLENETMRKKFMAAMESETNRKYGEANFGLPNGTDLNEVMRLH 867
             ..:|..|:.|      |:..:.:|:..       |::..:.:::.|.                 
Zfish  2003 -KHMEYLAEVCTRSVNDPIFQMKVEDGD-------ALQEVSKQEWQEQ----------------- 2042

  Fly   868 LVDRIIQFENDIYTGDLGRLK-VKDMEKWRSDLLGGNYDAQCKLQWGPGGKLEDEAGSDNESHE- 930
              :|::|.       |:..|: |:|:|:   .::|.  |.|.|:.. |..:.|.|||.::.:.: 
Zfish  2043 --ERVLQL-------DISVLQWVEDLEQ---RVVGA--DLQLKVAI-PNAENETEAGQESSNTQF 2092

  Fly   931 ---THEEDDGALLGKYARKPYRDPGMYLAASADTKPLPDSDD----EEDQHTNAVSIP-----IA 983
               |..|.|..          |:...|.....|.:     ||    .:.:.::.:.:|     :|
Zfish  2093 QIFTPPEPDST----------REDLQYYEHEVDPR-----DDWIVKTKKEWSDLLRVPSNPLDLA 2142

  Fly   984 VHNMASALLQVEQAIGKRFLKEPYGMKKWD-------------PKQEALKLACDS-------RLH 1028
            :..:|:    :|:.|.:||||||.    |:             |..|.:.|...|       ||.
Zfish  2143 ILRLAN----LERNIERRFLKEPL----WNAADVVRLAPLTPPPGGEEVPLDAVSLESEITPRLR 2199

  Fly  1029 QWEVSLMESTSFAQVFLHLNILHDCIQWRRSTNKSLCKVCRRGSDPEKMLLCDECNAGTHMFCLK 1093
            .|...|....|.:|:.|.|..|...|.|.||..|..|:|||:|.|.|.:||||.|:.|.|||||:
Zfish  2200 TWRQGLDRCRSSSQLSLCLLQLEKAIAWERSIIKVTCQVCRKGDDDEYLLLCDGCDRGCHMFCLR 2264

  Fly  1094 PKLRSVPPGNWYCNDCV-KSLGLSNGQNEKDKKQATKKKRKFIVEEEDDEATDEEEEEKKDDDMT 1157
            ||:..||.|:|:|.:|| |..|.|.......::::..:||:.     .::::||||..::  .||
Zfish  2265 PKVLQVPDGDWFCPNCVAKKTGESPRSQRSSRQRSKVRKRRL-----GEDSSDEEEGFRR--SMT 2322

  Fly  1158 DEDAEHENEKHDEDVEDDESVTSTPSSSRVNGRILRRPRTRPTSRRLTSKEIEEHAQEDVDSGDV 1222
            ....|                |..||||..:..|....|.|.|:|.          |.|:     
Zfish  2323 TRQKE----------------TPAPSSSSSSTSISPSKRRRMTTRN----------QPDL----- 2356

  Fly  1223 SDDASLTAGEDTIEDESDEEKVCQKCFYDGGEIKCVQCRLFFHLECVHLKRPPRTDFVCKTCKPM 1287
                                               ..|.:                         
Zfish  2357 -----------------------------------TYCEI------------------------- 2361

  Fly  1288 PQRPRRRHSNMNGDHDRDEEEPKAKRPRNSLRLSIDKTARPSNGNNNNNNNNSSVNNNNHRRSGR 1352
                                                                             
Zfish  2362 ----------------------------------------------------------------- 2361

  Fly  1353 RTNEHMPLNSAALYDLLEQIMKHKAAWPFLRPVLTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQL 1417
                           :|.::..|..|||||.||....||.|.:|||.|||...::.:|..|.|..
Zfish  2362 ---------------ILMEMEAHSDAWPFLEPVNPRMVPGYRRIIKNPMDFLTMRERLLQGGYCS 2411

  Fly  1418 NEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFVIDR 1456
            .||..:|.||||.||:|:|.:.:|:..||..:.||...|
Zfish  2412 CEEFAADAQLVFNNCELFNEDTSEVGQAGHAMRRFFESR 2450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:463140 11/62 (18%)
DDT 346..411 CDD:214726 19/69 (28%)
WSD 641..>666 CDD:464775 11/24 (46%)
WSD <774..805 CDD:464775 12/62 (19%)
PHD_RSF1 1064..1109 CDD:277018 25/44 (57%)
PHD 1244..1284 CDD:214584 1/39 (3%)
Bromo_Acf1_like 1349..1463 CDD:99936 38/108 (35%)
baz2aNP_001307060.1 PHA03247 <298..629 CDD:223021
HAT_MBD 1049..1123 CDD:238691
DDT 1389..1451 CDD:470652 20/89 (22%)
WSD 1648..>1678 CDD:464775 12/29 (41%)
WSD <1971..2004 CDD:464775 13/35 (37%)
PHD_BAZ2A 2235..2281 CDD:277099 25/45 (56%)
Bromo_BAZ2A_B_like 2355..2451 CDD:99935 40/241 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.