DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acf and Brd8

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_651685.2 Gene:Brd8 / 43460 FlyBaseID:FBgn0039654 Length:872 Species:Drosophila melanogaster


Alignment Length:833 Identity:160/833 - (19%)
Similarity:279/833 - (33%) Gaps:207/833 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   705 YGD--DEKKTKKKAKHSLENKENQEHRLNGSAEPMDVESDSPEAPTHFELLMCSGDKRSCIVHDS 767
            ||:  :..:..|:.|.|.|:..       |.:.|..||:     ||...|...:.::::.|....
  Fly    71 YGNLLESVEATKRKKRSSESSA-------GVSSPATVET-----PTELLLRRLTEERQAEIKAQM 123

  Fly   768 RNGQRQRWAYIYKAEEIDELIKALNPNGLREYELLQELSVLRSLIEQHAKTCPVDLLSLEN---- 828
            |..|.     .|:  .|...|::|..:.:.|    |||..:...||:..:...::.:.|||    
  Fly   124 RQDQE-----TYR--RIQREIESLQSDAVTE----QELQDMWLEIEKEQEARRIEEMKLENRMRE 177

  Fly   829 ETMRKKFMAAMESETNRKYGEANFGLPNGTDLNEVMRLHLVDRIIQFENDIYTGDLGRLKVKDME 893
            ...|||.:|:       .:..::..:...   |:......||..::   ||.|...|:     .:
  Fly   178 REQRKKDLAS-------NWRNSSLAVKRS---NQAADTTSVDMDVE---DINTSGNGK-----QQ 224

  Fly   894 KWRSDLL-------GGNYDAQCKLQWGPGGKLEDEAGSDNESHET-------------------- 931
            ...|.||       .||..|...    |||......|:.:.:..|                    
  Fly   225 TGPSPLLTSLLKSPTGNAPATPT----PGGAAPAAGGTGSVARATAPTITSLLTSGPSSAVANQP 285

  Fly   932 ----HEEDDGALLGKYARKPYRDPGMYLAASADTKPLPDSDDEEDQHTNAVSIPIAVHNMASALL 992
                ....|.|.:.    :|...|.   |:.|.|.|..:....:...|.::   :...|||:|  
  Fly   286 VITMKSPTDAAFMS----RPITGPP---ASEASTTPTLERSPSQAAPTLSM---LLEKNMAAA-- 338

  Fly   993 QVEQAIGKRFLKEPYGMKKW-----DPKQEALKLACDSRLHQWEVSLMESTSFAQVFLHLNILHD 1052
               :|.....|.:|.|....     :....|...|........|..|:|      ||.:::.:.|
  Fly   339 ---KANESGSLVKPEGSGNQEQGVDEATSSAAGTADSDEADPNEAQLLE------VFKNIDQIID 394

  Fly  1053 CIQWRRST--NKSLCK-----VCRRGSDPEKML-LCDECNAGTHMFCLKPKLRSVPPGNWYCNDC 1109
            .|....::  :..:.|     |....:|..::: ..|:.:|      ||.:.....|    .:|.
  Fly   395 DIDIDMASVIDDEILKNVDDVVASPSNDKAEVIDFEDKLDA------LKREQSKSSP----ASDK 449

  Fly  1110 VKSLGLSNG----------------QNEKDKKQATKKKRKFIVEEEDDEATDEEEEEKKDDDMT- 1157
            .||:.|..|                |..||:.|:..:..:...:.|.:..|.|...|:..:.:| 
  Fly   450 PKSVELVIGSSDDSNDNIPLAAVASQESKDRGQSGGESTRGTEDAESEPLTSEVAVEEIGETITI 514

  Fly  1158 ----------------DEDAEHENEKHDEDVEDD--ESVTSTPSSSRVNG-----RILRRPRTRP 1199
                            :||...::....||..:|  |..:|:...::..|     .::....||.
  Fly   515 ISTSSEDTAGSPPTKMEEDGATDSLPKKEDAAEDKSEQESSSQGQNKAGGSTDEPELIDHQATRE 579

  Fly  1200 TSRR-----------LTSKEIEEHAQEDVDSGDVSDDASLTAGEDTIEDESDEEKV---CQKCFY 1250
            ...:           :..|...:.|...||..|..:::|........:|.....|.   ..|...
  Fly   580 AQSKSGKDTAGKPVTMQEKTTTQSAPVPVDLHDTDEESSSLTDSSKHDDHPRSAKAKPPALKLAL 644

  Fly  1251 DGGEIKCVQCRLFFHLECVHLKRPPRTDFVCKTCKPMPQRPRRRHSNMNGDHD--RDEEEPKAKR 1313
            |..:.:         ||.....:||.........:.:|.|.|.....::.|..  .|....::.|
  Fly   645 DDSKSE---------LELSGTPQPPSAPARTPLLRKLPHRDRSESPMVDDDATTASDHSTARSTR 700

  Fly  1314 PRNSLRLSIDKTARPSNGNNNNNNNNSSVNNNNHRRSGRRTNEHMPLNSAALYDLLEQIMKHKAA 1378
            .|.|....||...          |:.:|..:.:.||..|..::.:.|:..|:  ||:.  ||.| 
  Fly   701 RRCSSTPVIDSIP----------NSPASSEHTDDRRETRAASKKLFLSIYAM--LLDS--KHAA- 750

  Fly  1379 WPFLRPVLTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELLSDIQLVFRN 1431
             ||.||........:..:...|||...||..::.|..:...||..|:.|:..|
  Fly   751 -PFKRPFHDEHAQRHADLCLRPMDFPTIKRNIDSGFIRSLSELHRDVLLMAHN 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503
DDT 346..411 CDD:214726
WHIM1 505..554 CDD:292246
WHIM2 637..666 CDD:292247
WHIM3 775..813 CDD:292248 8/37 (22%)
PHD_RSF1 1064..1109 CDD:277018 8/50 (16%)
PHD 1244..1284 CDD:214584 6/42 (14%)
Bromo_Acf1_like 1349..1463 CDD:99936 24/83 (29%)
Brd8NP_651685.2 PaaSYMP <105..188 CDD:291408 21/100 (21%)
PHA03249 402..>582 CDD:223023 32/189 (17%)
Bromo_brd8_like 729..833 CDD:99939 23/80 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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