DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acf and tbrd-2

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster


Alignment Length:135 Identity:43/135 - (31%)
Similarity:63/135 - (46%) Gaps:21/135 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1350 SGRRTN------EHMPLNSAALYDLLEQIMKHKAAWPFLRPVLTSE--VPDYHQIIKTPMDLAKI 1406
            :||.||      :|          ||::..|.|.|..||.||.|..  ||.|:.:|..|||:..|
  Fly    28 AGRYTNKLHYFKKH----------LLDEARKKKYALDFLEPVDTEALMVPTYYTVIHRPMDIGTI 82

  Fly  1407 KSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFVIDRCRDMQLPFRPS-DMN 1470
            ..::....|:...|.::|.:.:..||.|:|..|:.:|..|..||:|...:.|.|  |..|. ..|
  Fly    83 VKRVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVYRKGQMLEKFFHKKLRGM--PSGPEVPCN 145

  Fly  1471 GEVKA 1475
            .:.||
  Fly   146 RDPKA 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503
DDT 346..411 CDD:214726
WHIM1 505..554 CDD:292246
WHIM2 637..666 CDD:292247
WHIM3 775..813 CDD:292248
PHD_RSF1 1064..1109 CDD:277018
PHD 1244..1284 CDD:214584
Bromo_Acf1_like 1349..1463 CDD:99936 38/120 (32%)
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 33/111 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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