DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Acf and Brd4

DIOPT Version :9

Sequence 1:	NP_536734.2	Gene:	Acf / 43751	FlyBaseID:	FBgn0027620	Length:	1476	Species:	Drosophila melanogaster
Sequence 2:	NP_001094373.1	Gene:	Brd4 / 362844	RGDID:	1307282	Length:	1403	Species:	Rattus norvegicus

Alignment Length:	137	Identity:	44/137 - (32%)
Similarity:	73/137 - (53%)	Gaps:	7/137 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly  1326 ARPSNGNNNNNNNNSSVNNNNHRRSGRRTNEHMPLNSAALYDLLEQIMKHKAAWPFLRPV--LTS 1388
            |:|.:. |..:.|......:|..:..|:||:...|    |..:|:.:.||:.||||.:||  :..
  Rat    33 AQPQSA-NAASTNPPPPETSNPNKPKRQTNQLQYL----LRVVLKTLWKHQFAWPFQQPVDAVKL 92

  Fly  1389 EVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFV 1453
            .:|||::|||||||:..||.:|....|...:|.:.|...:|.||.:||..|::|......||:..
  Rat    93 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157

  Fly  1454 IDRCRDM 1460
            :.:..::
  Rat   158 LQKINEL 164

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Acf	NP_536734.2	WAC_Acf1_DNA_bd	26..125	CDD:287503
		DDT	346..411	CDD:214726
		WHIM1	505..554	CDD:292246
		WHIM2	637..666	CDD:292247
		WHIM3	775..813	CDD:292248
		PHD_RSF1	1064..1109	CDD:277018
		PHD	1244..1284	CDD:214584
		Bromo_Acf1_like	1349..1463	CDD:99936	39/114 (34%)
Brd4	NP_001094373.1	Bromo_Brdt_I_like	58..164	CDD:99929	39/109 (36%)
		Bromo_Brdt_II_like	354..455	CDD:99930
		BET	610..674	CDD:293640
		BRD4_CDT	1361..1403	CDD:293710
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166352458
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5076
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.830