DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Acf and brdt

DIOPT Version :9

Sequence 1:	NP_536734.2	Gene:	Acf / 43751	FlyBaseID:	FBgn0027620	Length:	1476	Species:	Drosophila melanogaster
Sequence 2:	XP_002662470.2	Gene:	brdt / 333996	ZFINID:	ZDB-GENE-030131-5928	Length:	1093	Species:	Danio rerio

Alignment Length:	127	Identity:	39/127 - (30%)
Similarity:	62/127 - (48%)	Gaps:	6/127 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly  1336 NNNNSSVNNNNHRRSGRRTNEHMPLNSAALYDLLEQIMKHKAAWPFLRPV--LTSEVPDYHQIIK 1398
            |.|.......|.::.||.||....:...    ::..:.||..:|||.:||  :...:|||:.|||
Zfish    13 NGNPPPPEFKNPKKPGRLTNHLQYIEKV----VIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIK 73

  Fly  1399 TPMDLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFVIDRCRDM 1460
            .||||..|:.:|....|....|.:.|...:|.||.:||..|::|......||:..:::..:|
Zfish    74 NPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAEM 135

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Acf	NP_536734.2	WAC_Acf1_DNA_bd	26..125	CDD:287503
		DDT	346..411	CDD:214726
		WHIM1	505..554	CDD:292246
		WHIM2	637..666	CDD:292247
		WHIM3	775..813	CDD:292248
		PHD_RSF1	1064..1109	CDD:277018
		PHD	1244..1284	CDD:214584
		Bromo_Acf1_like	1349..1463	CDD:99936	36/114 (32%)
brdt	XP_002662470.2	Bromo_Brdt_I_like	29..135	CDD:99929	34/109 (31%)
		Bromo_Brdt_II_like	273..373	CDD:99930
		BET	514..577	CDD:293640
		BRD4_CDT	1050..1093	CDD:293710
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170594391
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.930