DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acf and Ep300

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:XP_006521152.1 Gene:Ep300 / 328572 MGIID:1276116 Length:2422 Species:Mus musculus


Alignment Length:1053 Identity:186/1053 - (17%)
Similarity:316/1053 - (30%) Gaps:387/1053 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 EPEKREALVEKLKKSIAELHA-------QSDQQHRKHELQMLKLHSQLFNFLVYLGMDRCYRKYY 651
            :||||:.:.::|   :..|||       |::.:.|:..|...:....:.|.     |..|     
Mouse   332 DPEKRKLIQQQL---VLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLNH-----MTHC----- 383

  Fly   652 VLESMPGIFVEHSPDSLDTCLEQPITNKSQIEIRQQSALPKN--RKDLRVYL-LKLYGDDEKKTK 713
              :|.....|.|...|                 ||..:..||  |.|..|.| ||..||      
Mouse   384 --QSGKSCQVAHCASS-----------------RQIISHWKNCTRHDCPVCLPLKNAGD------ 423

  Fly   714 KKAKHSLENKENQEHRLNGS----AEPMDV---ESDSPEAPTHFELLMCSGDKRSCIVHDSRNGQ 771
                     |.||:..|.|:    ..|..:   :..:|...|..::             |..:.:
Mouse   424 ---------KRNQQSILTGAPVGLGNPSSLGVGQQSTPSLSTVSQI-------------DPSSIE 466

  Fly   772 RQRWAYI-----YKAEEI--DELIKALN----PNGLREYELLQELSVLRSLIEQHAKTCPV---- 821
            |   ||.     |:..:|  ...::|.|    |:|       |....:||:....|....|    
Mouse   467 R---AYAALGLPYQVNQIPPQPQVQAKNQQSQPSG-------QSPQGMRSVNNMSASPMGVNGGV 521

  Fly   822 -----DLLSLENETMRKKFMAAMESETNRKYGEANFG------LPNGT--------DLNEVMRLH 867
                 :|||   ::|....:.:.....:...|.|:.|      .|:.|        |:.:.:|.|
Mouse   522 GVQTPNLLS---DSMLHSTINSQNPMMSENAGVASLGPLPTAAQPSSTGIRKQWHEDITQDLRNH 583

  Fly   868 LVDRIIQ-------------------------FENDIYTGDLGRLKV------------KDMEKW 895
            ||.:::|                         .|.|:|.....|.:.            |::|:.
Mouse   584 LVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEK 648

  Fly   896 RSDLLGGNYDAQCKLQWGPG-GKLEDEAGSDNESHETHEEDDGALLGKYARKPYRDPGMYLAASA 959
            |...|    ..|..|...|| |.:....||:.....|         |.....|..||.| :..|.
Mouse   649 RRTRL----QKQNMLPNAPGMGPVPMNTGSNMGQQPT---------GMTTNGPVPDPSM-IRGSV 699

  Fly   960 DTKPLPDSDDEED-QHTNAVSIPIAVHNMASALLQVEQAIGKRFLKEPYGMKKWDPKQEALKLAC 1023
            ....:|....:.. .....:::|                      :.|.|.::..|.|...:||.
Mouse   700 PNHMMPRMTPQPGLNQFGQMNMP----------------------QPPIGPRQPSPLQHHGQLAQ 742

  Fly  1024 DSRLH------------QWEVSLMESTSFAQVFLHLNILHDCIQWRRSTNKSLCKVCRRGSDPEK 1076
            ...|:            ..:...:..|.|..            |....||..|.....:....:.
Mouse   743 SGSLNPPMGYGPRMQQASGQNQFLSQTQFTS------------QGMNVTNMPLAPSSGQAPVSQA 795

  Fly  1077 MLLCDEC----------NAGTHMFCLK-------------------------------------- 1093
            .:....|          :.|:|:.|..                                      
Mouse   796 QMSSSSCPVNSPIMPPGSQGSHIHCPTLPQQAHQNSPSPVPSRTPTPHHTPPSIGNQPPPATAIP 860

  Fly  1094 ---PKLRSVPPGNWYCNDCVKSLGLSNGQNEKDKKQATKKKRKFIVEEEDDEATDEEEEEKKDDD 1155
               |...::|||     ....||..|:.|..........:.:..:...   .:.|:.:::.:...
Mouse   861 TPVPTPPAIPPG-----PQPPSLHPSSRQTPTPPTHLPPQVQPSLPAA---PSADQSQQQPRSQQ 917

  Fly  1156 MTDEDA----------EHENEKHDEDVEDDESVTSTP--SSSRVNGRILRRPRTRPTSRRLTSKE 1208
            .|....          :.........|..:..|::.|  ||:.||.:.:  |..:|      |:|
Mouse   918 STAVSVPTPTAPLLPPQPSTPLSQPAVSIEGQVSNPPSTSSTEVNSQTI--PEKQP------SQE 974

  Fly  1209 IEEHAQEDVDSGDVSDDASLTAGEDTIEDESDEEKVCQKCFYDGGEIKCVQCRLFFHLECVHLKR 1273
            ::..::.:||..:.:|    ...|||.|.:.::.||                             
Mouse   975 VKMESKMEVDKPEPAD----AQPEDTKEAKGEDVKV----------------------------- 1006

  Fly  1274 PPRTDFVCKTCKPMPQRPRRRHSNMNGDHDRDEEEPKAKRPRNSLRLSIDKTARPSNGNNNNNNN 1338
                         .|.....|...:..|...:||:|.....::|          |:.|       
Mouse  1007 -------------EPTEMEERGPELKTDGKEEEEQPSTSATQSS----------PAPG------- 1041

  Fly  1339 NSSVNNNNHRRSGRRTNEHMPLNSAALYDLLEQIMKHKAAWPFLRPV--LTSEVPDYHQIIKTPM 1401
                      :|.::..:...|..|.:..|.....:...:.||.:||  ....:|||..|:|:||
Mouse  1042 ----------QSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKSPM 1096

  Fly  1402 DLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFV----------IDR 1456
            ||:.||.||:.|.||...:.:.||.|:|.|..|||.:.:.:|....:|....          :..
Mouse  1097 DLSTIKRKLDTGQYQEPWQYIDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEIDPVMQSLGY 1161

  Fly  1457 CRDMQLPFRPSDM 1469
            |...:|.|.|..:
Mouse  1162 CCGRKLEFSPQTL 1174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503
DDT 346..411 CDD:214726
WHIM1 505..554 CDD:292246
WHIM2 637..666 CDD:292247 5/28 (18%)
WHIM3 775..813 CDD:292248 11/48 (23%)
PHD_RSF1 1064..1109 CDD:277018 9/95 (9%)
PHD 1244..1284 CDD:214584 1/39 (3%)
Bromo_Acf1_like 1349..1463 CDD:99936 35/125 (28%)
Ep300XP_006521152.1 KIX 567..647 CDD:366953 11/79 (14%)
PABP-1234 <714..848 CDD:130689 18/167 (11%)
Merozoite_SPAM 959..>1048 CDD:284533 25/169 (15%)
Bromo_cbp_like 1050..1157 CDD:99927 33/106 (31%)
RING_CBP-p300 1169..1251 CDD:276805 2/6 (33%)
PHD_p300 1252..1286 CDD:277116
HAT_KAT11 1315..>1526 CDD:369758
ZZ_CBP 1677..1717 CDD:239077
ZnF_TAZ 1738..1816 CDD:214717
Med15 1968..>2344 CDD:312941
Creb_binding 2016..2109 CDD:370251
Med15 88..>328 CDD:312941
zf-TAZ 348..415 CDD:366931 18/95 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.