DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acf and bptf

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:XP_009297692.1 Gene:bptf / 324479 ZFINID:ZDB-GENE-030131-3200 Length:2900 Species:Danio rerio


Alignment Length:578 Identity:114/578 - (19%)
Similarity:198/578 - (34%) Gaps:206/578 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   973 QHTNAVSIPIAVHNMASALLQVEQAIGKRFLKEPYGMKKWDPKQE-ALKLACDSRLHQWEVSLME 1036
            |..|.|:|..|  ::...|.:::|...::..|:    |:.:.|:| |.:....|.|.|.:|:..:
Zfish  2420 QIQNLVTIQTA--SVQEQLQRIQQLCEQQQQKK----KQQEAKREQAQQHVSQSDLIQKQVAQKQ 2478

  Fly  1037 STSFAQVFLHLNILHDCIQWRRSTNKSLCKVCRRGSDPEKMLLCDECNAGTHMFCLKPKLRSVPP 1101
            :.:..|:               ...|::....|  .:.::|::|::.     |..:..|:     
Zfish  2479 NVAIEQL---------------KQKKTMTPAER--EENQRMIVCNQV-----MKFILDKI----- 2516

  Fly  1102 GNWYCNDCVKSLGLSNGQNEKDKKQATKKKRKFIVEEEDDEATDEEEEEKKDDDMTDEDAEHENE 1166
                               :||::||.||:::            ||..|:|..............
Zfish  2517 -------------------DKDERQAAKKRKR------------EESVEQKRSKQNASKLSALLF 2550

  Fly  1167 KHDEDVEDDESVTSTPSSSRVNGRILRRPRTRPTSRRLTSKEIEEHAQED--------------- 1216
            ||.|.::.|               ||::       |.|..||::...||:               
Zfish  2551 KHKEQLKAD---------------ILKK-------RALLDKELQLQVQEELKRDLIKLRREKEKA 2593

  Fly  1217 --------------------VDSGDVSDDASLTAGEDTIEDESDEEK------------------ 1243
                                |.||..|...::|:...|.:.:.:||:                  
Zfish  2594 QAAAAQAAAAAAAAAAASTHVHSGLSSYTGTVTSPTSTHKRKREEERDAAKPKRKKMISTTSKDS 2658

  Fly  1244 --------VCQKCFYDGGE--IKCVQCRLFFHLECVHL---KRPPRTDFVCKTCKPMPQRPRRRH 1295
                    :| |..||..:  |.|..|..::|.|||.:   :.....|::|..||      |.:.
Zfish  2659 KRDIKLYCIC-KTPYDESKFYIGCDLCSNWYHGECVGITEKEAKKMDDYICSECK------RAQE 2716

  Fly  1296 SN-------MNGDHDRDEEEPKAKRPRN-----------SLRLSIDKTARPSNGNNNNNNNNSSV 1342
            .|       ....:|..:......|.:|           |....||:...|              
Zfish  2717 GNTEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEATHIDEYVCP-------------- 2767

  Fly  1343 NNNNHRRSGRRTNEHM----PLNS---AALYDLLEQIMKHKAAWPFLRPVLTSEVPDYHQIIKTP 1400
                   ..:.|.:.|    ||..   ..|..:|..:..||.|||||.||..::.|||:.|||.|
Zfish  2768 -------QCQSTEDAMTVLTPLTDKDYEGLKRILRSLQSHKMAWPFLEPVDPNDAPDYYGIIKEP 2825

  Fly  1401 MDLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFVIDRCR 1458
            |||:.::.::....|....|.::|:..:|.||..||...:..|.....||.|.:.:.:
Zfish  2826 MDLSTMEERIQKRFYSKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEFLESFFVQKLK 2883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503
DDT 346..411 CDD:214726
WHIM1 505..554 CDD:292246
WHIM2 637..666 CDD:292247
WHIM3 775..813 CDD:292248
PHD_RSF1 1064..1109 CDD:277018 5/44 (11%)
PHD 1244..1284 CDD:214584 13/44 (30%)
Bromo_Acf1_like 1349..1463 CDD:99936 37/117 (32%)
bptfXP_009297692.1 DDT 198..254 CDD:280886
WHIM1 296..345 CDD:292246
PHD1_BPTF 349..391 CDD:277034
WHIM2 414..439 CDD:292247
PP28 <1833..1881 CDD:287254
PHD2_3_BPTF 2665..2711 CDD:277035 13/46 (28%)
PHD2_3_BPTF 2723..2769 CDD:277035 7/66 (11%)
Bromo_gcn5_like 2785..2885 CDD:99941 33/99 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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