DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acf and Brd8dc

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_808441.2 Gene:Brd8dc / 271508 MGIID:3045347 Length:273 Species:Mus musculus


Alignment Length:352 Identity:70/352 - (19%)
Similarity:119/352 - (33%) Gaps:118/352 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1115 LSNGQNEKDKKQATKKKRKFIVEEEDDEATDEEEEEKKDDDMTDEDAEHENEKHDE--------- 1170
            |.:||:..|..:.:...|..:  ...|.:.|.:....||.:..:.:|:...|...|         
Mouse    12 LDSGQDSHDDSELSNDCRSLL--SSWDSSLDLDVGSWKDTEDAEAEADEPKESSPERGCSELLVG 74

  Fly  1171 DVEDDESVTSTPSSSRVNGRILRRPRTRPTSRRLTSK-EIEEHAQEDVDSGDVSDDASLTAGEDT 1234
            |||.:|:               |....:.|.:.|.|: |.::.::|| |.|    :.|.:.||||
Mouse    75 DVESEEA---------------REEAEQGTPQELLSEGEAQQDSKED-DQG----EGSASDGEDT 119

  Fly  1235 IEDESDEEKVCQKCFYDGGEIKCVQCRLFFHLECVHLKRPPRTDFVCKTCKPMPQRPRRRHSNMN 1299
                                                   ||..:                     
Mouse   120 ---------------------------------------PPLGE--------------------- 124

  Fly  1300 GDHDRDEEEPKAKRPRNSLRLSIDKTARPSNGNNNNNNNNSSVNNNNHRRSGRRTNEHMPLNSAA 1364
            |:..|.:|.|......:|.:|                         |....|....:.. |....
Mouse   125 GEGIRVQEAPLVNILYSSSQL-------------------------NDLSQGDPIQDQF-LFKKT 163

  Fly  1365 LYDLLEQIMKHKAAWPFLRPVLTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELLSDIQLVF 1429
            |..:.:.|..|:.:.|||:||...:.|.|..::|.||||..:|..|:.|......|...|:.|:|
Mouse   164 LLQVWKMIASHRFSSPFLKPVSEKQAPGYKDVVKRPMDLTTLKRNLSKGRIHTMAEFQRDLMLMF 228

  Fly  1430 RNCDLYNVEGNEIYDAGCQLERFVIDR 1456
            :|..:||...:.||....:::|.|:::
Mouse   229 QNAVMYNDSDHHIYHMAVEMQREVLEQ 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503
DDT 346..411 CDD:214726
WHIM1 505..554 CDD:292246
WHIM2 637..666 CDD:292247
WHIM3 775..813 CDD:292248
PHD_RSF1 1064..1109 CDD:277018
PHD 1244..1284 CDD:214584 2/39 (5%)
Bromo_Acf1_like 1349..1463 CDD:99936 31/108 (29%)
Brd8dcNP_808441.2 Bromo_brd8_like 160..259 CDD:99939 29/96 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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