DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acf and Bptf

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:XP_006532738.1 Gene:Bptf / 207165 MGIID:2444008 Length:3158 Species:Mus musculus


Alignment Length:580 Identity:114/580 - (19%)
Similarity:201/580 - (34%) Gaps:187/580 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   978 VSIPIAVHNMASALLQ----VEQAIGKRFLKEPYGMKKWDPKQEALKLACDSRLHQWEVSLMEST 1038
            :.:||.|...::|..|    |:.|..:..|:....::  |.:|:..:.....|.|..:.|.....
Mouse  2650 LQLPIQVQQNSAAQTQSVVTVQAASVQEQLQRVQQLR--DQQQKKKQQIETEREHTLQASNQSEI 2712

  Fly  1039 SFAQVFLHLNILHDCIQWRRSTNKSLCKVCRRGSDPEKMLLCDECNAGTHMFCLKPKLRSVPPGN 1103
            ...||.:..|.:.:.::.:::...:      ...:.::|::|::        .:|          
Mouse  2713 IQKQVVMKHNAVIEHLKQKKTMTPA------EREENQRMIVCNQ--------VMK---------- 2753

  Fly  1104 WYCNDCVKSLGLSNGQNEKDKKQATKK-KRKFIVEEE---------------------------- 1139
             |..|.:          :|::|||.|| ||:..||::                            
Mouse  2754 -YILDKI----------DKEEKQAAKKRKREESVEQKRSKQNASKLSALLFKHKEQLKAEILRKR 2807

  Fly  1140 ---DDEATDEEEEEKKDDDMTDEDAEHENEKHDEDVEDDESVTSTPS-----SSRVNGRILRRPR 1196
               |.|...:.:||.|.|.....:.|..     :.|:.:.:...|||     .:.........||
Mouse  2808 ALLDKELQIQVQEELKRDLKMKREREMA-----QAVQANAASVPTPSVPAPVPAPAPAAPPAPPR 2867

  Fly  1197 TRPTSRR-------------LTSKEIEEHAQEDVDS--GDVSDDASLTAGEDT-----IEDESDE 1241
            :.|.|..             :||::.:...::|..|  ..:....|..|.:||     .:...||
Mouse  2868 SPPPSTHSLPPAGHPTAPLPVTSQKRKREEEKDSKSKKKKMISTTSKEAKKDTRLYCICKTPYDE 2932

  Fly  1242 EKVCQKCFYDGGEIKCVQCRLFFHLECVHL--KRPPRTD-FVCKTCKPMPQRPRRRHSN------ 1297
            .|     ||.|    |..|..::|.|||.:  |...:.| ::|..||    |.:...|.      
Mouse  2933 SK-----FYIG----CDLCTNWYHGECVGITEKEAKKMDVYICNDCK----RAQEGSSEELYCIC 2984

  Fly  1298 ----------------MNGDHDR------------DEEE-PKAKRPRNSLRLSIDKTARPSNGNN 1333
                            .|..|.|            ||.. |:.:...:::.:....|.:...|  
Mouse  2985 RTPYDESQFYIGCDRCQNWYHGRCVGILQSEADLIDEYVCPQCQSTEDAMTVLTPLTEKDYEG-- 3047

  Fly  1334 NNNNNNSSVNNNNHRRSGRRTNEHMPLNSAALYDLLEQIMKHKAAWPFLRPVLTSEVPDYHQIIK 1398
                                           |..:|..:..||.|||||.||..::.|||:.:||
Mouse  3048 -------------------------------LKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIK 3081

  Fly  1399 TPMDLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFVIDRCR 1458
            .|||||.::.::....|:...|.::|:..:|.||..||......|.....||.|.:.:.:
Mouse  3082 EPMDLATMEERIQKRYYEKLTEFVADMTKIFDNCRYYNPRDTPFYQCAEVLESFFVQKLK 3141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503
DDT 346..411 CDD:214726
WHIM1 505..554 CDD:292246
WHIM2 637..666 CDD:292247
WHIM3 775..813 CDD:292248
PHD_RSF1 1064..1109 CDD:277018 4/44 (9%)
PHD 1244..1284 CDD:214584 12/42 (29%)
Bromo_Acf1_like 1349..1463 CDD:99936 33/110 (30%)
BptfXP_006532738.1 DDT 253..309 CDD:367184
WHIM1 356..393 CDD:373966
PHD1_BPTF 404..446 CDD:277034
WSD 468..536 CDD:373967
MDN1 <578..749 CDD:227596
DUF5585 <2038..2345 CDD:375359
Med15 <2246..>2609 CDD:312941
TPH 2696..>2836 CDD:372768 28/179 (16%)
PHD2_3_BPTF 2923..2969 CDD:277035 15/54 (28%)
PHD2_3_BPTF 2981..3027 CDD:277035 6/45 (13%)
Bromo_gcn5_like 3043..3143 CDD:99941 34/132 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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