DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acf and sepa-1

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_493339.1 Gene:sepa-1 / 173196 WormBaseID:WBGene00010808 Length:702 Species:Caenorhabditis elegans


Alignment Length:835 Identity:160/835 - (19%)
Similarity:264/835 - (31%) Gaps:299/835 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   743 SPEAPTHFELLMCSGDKRSCIVHDSRNGQRQRWAYIYKAEEIDELI--KAL--NPNGLREYELLQ 803
            :|..|..|.|..|.    :..:|.....:..|..:.|:..:..:||  |.|  .|. |.|..:..
 Worm    12 APSPPPKFALGKCP----ATAIHVVSVLRPNRQRFCYEKTDAGDLIPHKCLICQPI-LTEKHISP 71

  Fly   804 ELSVLRSLIEQHAKTCPVDLLSLENETMRKK---FMAAMES----ETNR---KYGEANFGLPNGT 858
            ..:|...|:|        |.:.....||..|   |:.|.::    |.||   ||..|  .|..| 
 Worm    72 YYAVYSDLLE--------DFVLFGYNTMTGKMEQFIYAFKTDCFVEVNRPEIKYNPA--FLVKG- 125

  Fly   859 DLNEVMRLH-------LVDR----IIQFENDIY-------TGDLGRLKVKDMEKWRSDLLGGNYD 905
              |.|:.|:       :::|    ::..|:..|       |..|..|.::|:|:.|.| ...|.|
 Worm   126 --NVVVALNGPEGELVVIERDCRGLLSKESTSYGQFRTLPTAALRTLTLQDLERDRWD-RAANSD 187

  Fly   906 AQCKLQWGPGGKLEDEAGSDNESHETHEEDDGALLGKYARKPYRDP------------GMYLAAS 958
                         |.:..|.|||.:       .|..:|.:...|..            .:|...|
 Worm   188 -------------EVKISSGNESFD-------RLYAEYQKNLPRFQVRQCLHLNKEFLCVYSKTS 232

  Fly   959 ADTKPLPDSDDEED-----------QHTNAVSIPIAVHNMASALL---------QVEQAIGKRFL 1003
            .|...|...|:..|           :.|.:..||:.|...||.|:         |:||.|     
 Worm   233 GDYTRLEYIDETGDFQKISCTLCTCEVTESNLIPLYVERNASELVIHVHNTENNQIEQYI----- 292

  Fly  1004 KEPYGMKKWDPKQEALKLACDSRLHQWEVSLMESTSFAQVFLHLNILHDCIQWRRSTNKSLCKVC 1068
               |.::.:...|....|..|.:         :.||...:|:..||          .|:.:..: 
 Worm   293 ---YDVRTFGFVQVKRNLVYDPK---------KITSGLNLFMAENI----------DNRKVYMI- 334

  Fly  1069 RRGSDPEKMLLCDECNAGTHMFCLKPKLRSVPPGNWYCNDCVKSLGLSNGQNEKDKKQATKKKRK 1133
            .||.|                    .:|:....|              :|..||.:..|.|..:.
 Worm   335 MRGRD--------------------GRLQKETSG--------------SGGFEKMQPVAVKTFQV 365

  Fly  1134 FIVEEEDDEATDEEEEEKKDDDMTDEDAEHENEKHDEDVEDDESVTSTPSSSRVNGRILRR---- 1194
            ..||.       :.|.|||.......:.:|..:...||:.  |:|.:...|...:   ||:    
 Worm   366 QWVEM-------KTEFEKKKASTERVEPQHPVQTEGEDIM--ETVLAMVESFNCD---LRKELGL 418

  Fly  1195 ------PRTRPTSRRLTSKEIEEHAQEDVDSGDVSDD----------ASLTAGEDTIEDESDE-- 1241
                  ||..|   |:.|.|.||:..::::...::.|          ...|.|...::|...|  
 Worm   419 TQDQEIPRKAP---RVESAETEENIVKNLEKLQIAKDPEEPTTAASEGGNTYGYQELDDTMSEGL 480

  Fly  1242 -EKVCQKCFYDGGE---IKCVQCRLFFHLECVHLKRPPRTDFVCKTCKP----MPQRPRRRH--S 1296
             ||..:....|..|   :|.|                        |.:|    |.::.:||.  |
 Worm   481 LEKEAESKHQDANEPEPVKNV------------------------TYEPDVAAMDKKKKRRELKS 521

  Fly  1297 NMNGDHDRDEEEPKAKRPRNSLR------------LSIDKTARPSNGNNNNNNNNSSV------- 1342
            .:|..:.:.:|..|.:..|...:            ..::..|.|:...|.|..:|...       
 Worm   522 RLNKINAQIDELEKRRMERAGKKQVVSSSVPSEEAAQVEAPASPALAENTNQISNEETPKIDIFE 586

  Fly  1343 NNNNHRRSGRRTNEHMPLNSAALYDLLEQIMKH------KAAWPFLRPVLTSEVPDYHQIIKTPM 1401
            ..|.....|..|::..         ::|.|..|      ||.||.::.|                
 Worm   587 GYNGSFLFGTNTSKEW---------IVEDIRNHMVGKLLKAFWPRIQNV---------------- 626

  Fly  1402 DLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFVIDR 1456
                         .::|.||...:....|.|:...:|.:...|...:|.:..:|:
 Worm   627 -------------EEMNGELFKKLIANARKCETEILEASNDRDEYYRLMQLTVDQ 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503
DDT 346..411 CDD:214726
WHIM1 505..554 CDD:292246
WHIM2 637..666 CDD:292247
WHIM3 775..813 CDD:292248 10/41 (24%)
PHD_RSF1 1064..1109 CDD:277018 5/44 (11%)
PHD 1244..1284 CDD:214584 4/42 (10%)
Bromo_Acf1_like 1349..1463 CDD:99936 19/114 (17%)
sepa-1NP_493339.1 KIX 600..676 CDD:280354 17/107 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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