DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acf and Brdt

DIOPT Version :10

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:XP_006534791.1 Gene:Brdt / 114642 MGIID:1891374 Length:961 Species:Mus musculus


Alignment Length:117 Identity:43/117 - (36%)
Similarity:64/117 - (54%) Gaps:6/117 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1346 NHRRSGRRTNEHMPLNSAALYDLLEQIMKHKAAWPFLRPV--LTSEVPDYHQIIKTPMDLAKIKS 1408
            |.::|||.||:...|...    :|:.:.||..:|||.:||  :..::|||:.||||||||..||.
Mouse    20 NTKKSGRLTNQLQFLQRV----VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKK 80

  Fly  1409 KLNMGAYQLNEELLSDIQLVFRNCDLYNVEGNEIYDAGCQLERFVIDRCRDM 1460
            :|....|:...|.:.|...:|.||.|||..|::|......||:..:.:...|
Mouse    81 RLENKYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:463140
DDT 346..411 CDD:214726
WSD 641..>666 CDD:464775
WSD <774..805 CDD:464775
PHD_RSF1 1064..1109 CDD:277018
PHD 1244..1284 CDD:214584
Bromo_Acf1_like 1349..1463 CDD:99936 42/114 (37%)
BrdtXP_006534791.1 Bromo_Brdt_I_like 26..132 CDD:99929 39/109 (36%)
Bromo_Brdt_II_like 271..372 CDD:99930
BET 505..567 CDD:435704
BRD4_CDT 919..961 CDD:465349
Blue background indicates that the domain is not in the aligned region.

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