DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acf and baz1b

DIOPT Version :9

Sequence 1:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster
Sequence 2:XP_002933656.2 Gene:baz1b / 100038181 XenbaseID:XB-GENE-853544 Length:1436 Species:Xenopus tropicalis


Alignment Length:1778 Identity:341/1778 - (19%)
Similarity:589/1778 - (33%) Gaps:700/1778 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PICKREGFDLNQKEGKNETFHDNDQVFCCYITKRIFRDYEHYFRHVMVINSTVWQCEATGKENLT 66
            |:..|:.|.|.:...:.......::|:....:|..||..|.|...:......:|.|::||...||
 Frog     3 PLLGRKPFPLAKPLSEAPPGEGEEEVYIIEHSKEAFRSREEYESRLERYAERIWTCKSTGSSQLT 67

  Fly    67 YEEAVKSERAARKKM-EQFKQSLRAPVLLVVEHAQQSAVNTLNM--IVAKF---LRKRYFIGEEV 125
            ::||...|:...:.: |:|.......||.:|.|      ||:::  :|.:.   :..:|..|||.
 Frog    68 HKEAWDEEQEVTELLKEEFPVWYEKQVLEMVHH------NTISLDKLVDQSWMEIMTKYADGEEC 126

  Fly   126 SVQA-------------------------------------KKNATYTVLGVKL--DKNMPEPLN 151
            ..:.                                     |:|:......::|  :.|..|.|:
 Frog   127 DFEVGPEKYLRVTIVKVHPLEKEEQASEKKSEGSCDSPSSDKENSNKVAQDIQLKEESNRRESLS 191

  Fly   152 GIYEDTDNLVYRLRPNKGDPSAELD---------------------------LPFRQLRRSRMEF 189
            .:.| :|..  |..|.|...|.:.:                           :|...|.||....
 Frog   192 SLRE-SDRA--RRSPRKLPASLKKEEKKWVPPKFLPHKYDVKLLNEDKVISFVPVDSLYRSERPP 253

  Fly   190 NLENLSMFIKSNVSRV-----------DGLLR--PKPEAYKQYVTDP----GVNFSTIFIGK--- 234
            |.|.|..||:.|..|:           |.|::  ..|..:..::.||    .:|.|:....|   
 Frog   254 NKEILRYFIRHNALRLGTGENAPWVVEDELVKKYSLPSKFSDFLLDPHKYMTLNPSSATKRKSLG 318

  Fly   235 MPRYSPAK-----------------------------------------------IKKPDGKKQS 252
            .|.:.|||                                               .|||...|..
 Frog   319 SPDHKPAKKSKKSPLSPSSWCQVNLKKTGITSSSSEEEMQLMNGANLNKKGKKSDKKKPKSGKSQ 383

  Fly   253 TLNKYIVAGEATAAKSKAKA--------------------------------------------- 272
            .||...|:|:|.:.|...|:                                             
 Frog   384 LLNGQKVSGKARSPKKGLKSPKLKQMTLLDMAKTTPKVSRAQKGGASTPRSSSKPHKYLPPAALH 448

  Fly   273 --------------KS----------------DAKSLAEELERVKREKEAKLIELEKQ------- 300
                          ||                |.|.|.:||:.:. :|..:|:|..||       
 Frog   449 LISYYRDNKNREDRKSALSALISKVARMLSAEDRKRLPDELQELV-QKRYELLEHRKQWAVMTEE 512

  Fly   301 -------------KAEKKAQLIERVENECNLLLQKT---DDLERTDQKVLPRYRQIVTL--LPEH 347
                         ||..|.:..||.:.|....|:|.   :|.|.|. |.||.::.:.|.  ||..
 Frog   513 QRQEYMSKKREALKARIKEKARERKQKEREERLEKQKRYEDQELTG-KSLPTFKLVDTPEGLPNA 576

  Fly   348 LLGDAFMMREFMHTYTGLLSGIEVFRQNLSFYEMTRALTAREIAG--PLSDILLVLLGTVFDLQK 410
            |.||..|:.||:..|..||  :...:..::...:..||.| |..|  .|:.:|:|||.|:  ||.
 Frog   577 LFGDVAMVIEFLSGYADLL--LPDGQYPVTAVSIMEALAA-EKGGFMYLNRVLVVLLQTL--LQD 636

  Fly   411 EEEEECAVTYLDRAAQTQEPYWSMAQAAKSHLYAKRHFSFKVNELPLDALTLSEVLRLHL--LGS 473
            |..|:                           |.:  ...|::|:||...:.||::||.|  ..|
 Frog   637 EIAED---------------------------YGE--LGMKLSEIPLTLHSASELVRLCLRKSDS 672

  Fly   474 GAFVNEKAER------WRVMYRNGYSSKEDPGLELRLEHSHILRILKNHSVYQLKFKDIMLLIRC 532
            .|..:|..|:      ...:|::  ...||..|| ::|.|....:.....::        :|:..
 Frog   673 PAGESESTEKEDEDSEGSAVYQD--DEVEDEYLE-KMETSEFFELTTEEKLH--------ILVAL 726

  Fly   533 LMSQIMTYSGTINLIEERMEQTAKARQDLRALVVGENKRLAAVEINRKKLTQMHHLE-------- 589
            ....:|||| ..:.::.:.:::.:..::..|::..||.:..|.:..||:...|...|        
 Frog   727 CHRILMTYS-VQDHVDTKQQRSGELWKERLAILKEENDKKRAEKQRRKEQGSMKPKEEVVASKVV 790

  Fly   590 --------------------------VNGVEPEKREALVEKLKKSIAELHAQSDQQHRKHELQML 628
                                      :..::.:|.:...:||.|...|..|:.::..::......
 Frog   791 KKQEKTNTMQQDNDTEDMISAVKSRRLQAIQAKKEKEEHQKLTKERLEREAEEERSRKQKASAEK 855

  Fly   629 KLHSQLFNFLVY-----LGMDRCYRKYYVL-ESMPGIFVEHS--PDSLDTCLEQPITNKSQIEIR 685
            ..|..:....:.     ||.||.:.:|::. :.:||:|:|..  .||::.....|   :|:.|. 
 Frog   856 AFHEGIAKAKLVLRRSPLGTDRNHNRYWLFSDEVPGLFIEKGWVHDSINYRFSPP---ESEQEY- 916

  Fly   686 QQSALPKNRKDLRVYLLKLYGDDEKKTKKKAKHSLENKENQEHRLNGSAEPMDVESDSPEAPTHF 750
            :|.|......|..|      |..:..|:::.|                    .||...|      
 Frog   917 EQDAEESEDADSSV------GCPDDSTQREGK--------------------TVEMTVP------ 949

  Fly   751 ELLMCSGDKRSCIVHDSRNGQRQRWAYIYKAEEIDELIKALNPNGLREYELLQELSVLRSLIEQH 815
                             :.|| ..|......:|:|||:.:|:..|.||.:|              
 Frog   950 -----------------KQGQ-NLWFLCDTQKELDELLDSLHLQGFRESQL-------------- 982

  Fly   816 AKTCPVDLLSLENETMRKKFMAAMES-ETNRKYGEANFGLPNGTDLNEVMRLHLVDRIIQFENDI 879
                        .|.::.::...|.| ...||   .|.||.......|::..             
 Frog   983 ------------KERLQNRYQDIMHSIHLARK---QNLGLKTCDGQQELLNF------------- 1019

  Fly   880 YTGDLGRLKVKDMEKWRSDLLGGNYDAQCKLQWGPGGKLEDEAGSDNESHETHEEDDGALLGKYA 944
                           .|||::    :...:||.|..|.|:|          |.|.:         
 Frog  1020 ---------------LRSDII----EVATRLQKGGLGYLDD----------TTEFE--------- 1046

  Fly   945 RKPYRDPGMYLAASADTKPLPDSDDEEDQHTNAVSIPIAVHNMASALLQVEQAIGKRFLK---EP 1006
                          |..:.|.:..|                 ....::.::.|:.|:||:   .|
 Frog  1047 --------------AKVRTLENLKD-----------------FGECIVFLQAAVIKKFLQGFMAP 1080

  Fly  1007 YGMKKWDPKQEAL----------KLACD----SRLHQWEVSLMESTSFAQVFLHLNILHDCIQWR 1057
            ...|:....:||.          |:|.:    |.:.:|:.::.::.:|:::.:.|.:|..||:|.
 Frog  1081 KQKKRKHQSEEAAAKAEEQDEEKKMAEEAKVASAVEKWKTAIRDAQTFSRMHVLLGMLDACIKWD 1145

  Fly  1058 RSTNKSLCKVCRRGSDPEKMLLCDECNAGTHMFCLKPKLRSVPPGNWYCNDCVKSLGLSNGQNEK 1122
            .|:..:.|||||:..:.:|::||||||...|:|||:|.|.::|.|.|.|..|             
 Frog  1146 MSSENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPVLFNIPDGEWLCPAC------------- 1197

  Fly  1123 DKKQATKKKRKFIVEEEDDEATDEEEEEKKDDDMTDEDAEHENEKHDEDVEDDESVTSTPSSSRV 1187
              :.||.::........:|...||||||::    ::|:.|.|:|:.::::               
 Frog  1198 --QPATARRSSRGRNYAEDSTQDEEEEEEE----SEEEEEVESEEEEQEM--------------- 1241

  Fly  1188 NGRILRRPRTRPTSRRLTSKEIEEHAQEDVDSGDVSDDASLTAGEDTIEDESDEEKVCQKCFYDG 1252
                        ..:||.|:                                             
 Frog  1242 ------------MGQRLRSR--------------------------------------------- 1249

  Fly  1253 GEIKCVQCRLFFHLECVHLKRPPRTDFVCKTCKPMPQRPRRRHSNMNGDHDRDEEEPKAKRPRNS 1317
                                         |..|..|.||.||                 .||   
 Frog  1250 -----------------------------KAAKAKPGRPARR-----------------GRP--- 1265

  Fly  1318 LRLSIDKTARPSNGNNNNNNNNSSVNNN---------NHRRSGRRTNEHMPLNSAALYDLLEQIM 1373
                      |.|.|.:..:....|.:|         ..:.:.||.|:.:    ....::|.:::
 Frog  1266 ----------PKNSNQSRVSRQRYVEDNEADVEEMVRQSKPTSRRQNQEL----QKCEEILAKLI 1316

  Fly  1374 KHKAAWPFLRPVLTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVE 1438
            |::.:|||..||.|.|:.||..::..|||...::||.:.|:||..:|.|:|::|||.|.:||...
 Frog  1317 KYRFSWPFREPVNTDEIEDYMNVVTNPMDFQTMQSKCSCGSYQTVQEFLNDLKLVFGNTELYYEP 1381

  Fly  1439 GNEIYDAGCQLERFVIDRC-RDM 1460
            |:.  ...| ||:  .::| ||:
 Frog  1382 GSS--QLSC-LEK--TEQCARDL 1399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:287503 27/104 (26%)
DDT 346..411 CDD:214726 22/66 (33%)
WHIM1 505..554 CDD:292246 7/48 (15%)
WHIM2 637..666 CDD:292247 9/36 (25%)
WHIM3 775..813 CDD:292248 10/37 (27%)
PHD_RSF1 1064..1109 CDD:277018 22/44 (50%)
PHD 1244..1284 CDD:214584 1/39 (3%)
Bromo_Acf1_like 1349..1463 CDD:99936 38/113 (34%)
baz1bXP_002933656.2 WAC_Acf1_DNA_bd 28..126 CDD:402251 27/103 (26%)
PTZ00121 <457..863 CDD:173412 94/453 (21%)
WHIM1 696..741 CDD:406127 11/54 (20%)
tolA <737..>865 CDD:236545 15/127 (12%)
WSD 868..990 CDD:406128 37/201 (18%)
PHD_BAZ1B 1152..1197 CDD:277098 22/44 (50%)
Bromo_WSTF_like 1304..1400 CDD:99937 35/105 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9488
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858930at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.