DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mccc1 and CAC2

DIOPT Version :9

Sequence 1:NP_001247391.1 Gene:Mccc1 / 43750 FlyBaseID:FBgn0039877 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001190422.1 Gene:CAC2 / 833497 AraportID:AT5G35360 Length:555 Species:Arabidopsis thaliana


Alignment Length:444 Identity:213/444 - (47%)
Similarity:303/444 - (68%) Gaps:10/444 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KILISNRGEIACRVIRTARKLGVRTVAVFSDPDEKSMHTQLADESYRVGEAASSASYLRGERILD 93
            |||::||||||.||||||.::|:..|||:|..|:.::|.:||||:..:|||.|:.|||....:|.
plant    76 KILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAVCIGEAPSNQSYLVIPNVLS 140

  Fly    94 IAKRSGAQAIHPGYGFLSESVEFAELCQREGIIFMGPPSSAIRDMGIKSTSKAIMAAAGVPIING 158
            .|...|...:|||||||||:..|.|:|:..||.|:||...:||.||.|:|::..|..||||.:.|
plant   141 AAISRGCTMLHPGYGFLSENALFVEMCRDHGINFIGPNPDSIRVMGDKATARETMKNAGVPTVPG 205

  Fly   159 YHGDDQSDECLQREADKIGFPLMIKAVRGGGGKGMRIAEKPDDFLTALNSARTESEKSFGDSSVL 223
            ..|..||.|...|.|::||||:||||..||||:|||:|::|.:|:..|..|::|:..:||:....
plant   206 SDGLLQSTEEAVRVANEIGFPVMIKATAGGGGRGMRLAKEPGEFVKLLQQAKSEAAAAFGNDGCY 270

  Fly   224 LERYVRSPRHVEVQVFADQYGDAVYLWERDCSVQRRHQKIIEEAPAPGLSEDLRRELGEAAVRAA 288
            ||::|::|||:|.||.||::|:.|:..|||||:|||:||::||||:|.|:.:||:.:|:|||.||
plant   271 LEKFVQNPRHIEFQVLADKFGNVVHFGERDCSIQRRNQKLLEEAPSPALTAELRKAMGDAAVAAA 335

  Fly   289 KAVGYVGAGTVEFILDKEDLSFHFMEMNTRLQVEHPITEMITGTDLVEWQIRIAAGEPLPLKQSE 353
            .::||:|.|||||:||:.. ||:|||||||:|||||:||||...||:|.|||:|.||.|..||.:
plant   336 ASIGYIGVGTVEFLLDERG-SFYFMEMNTRIQVEHPVTEMIYSVDLIEEQIRVAMGEKLRYKQED 399

  Fly   354 ITRRGHAFEARIYAENPRGGFLPGAGPL-RYLSTPQPSNNVRVETGVREGDEVSVHYDPMIAKLV 417
            |..|||:.|.||.||:|..||.||.|.: .||.:..|.  ||:::.|.....|...||.::.||:
plant   400 IVLRGHSIECRINAEDPFKGFRPGPGRITSYLPSGGPF--VRMDSHVYSDYVVPPSYDSLLGKLI 462

  Fly   418 VWGENRTQALNSLVARLGEYHISGLDTNINF---LIDLASHPEFQLANVHTGFI 468
            ||...|.:|:..:...|.:..|:|:.|.||:   ::|:   .:|:...|.|.||
plant   463 VWAPTREKAIERMKRALNDTIITGVPTTINYHKLILDV---EDFKNGKVDTAFI 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mccc1NP_001247391.1 PccA 27..693 CDD:227111 213/444 (48%)
CPSase_L_chain 27..135 CDD:278706 53/105 (50%)
CPSase_L_D2 141..348 CDD:280881 111/206 (54%)
Biotin_carb_C 362..469 CDD:214878 38/111 (34%)
biotinyl_domain 626..691 CDD:133459
CAC2NP_001190422.1 accC 73..521 CDD:129605 213/444 (48%)
CPSase_L_chain 75..182 CDD:278706 53/105 (50%)
CPSase_L_D2 187..394 CDD:280881 111/207 (54%)
Biotin_carb_C 408..513 CDD:280880 36/109 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4770
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D254436at2759
OrthoFinder 1 1.000 - - FOG0004002
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100368
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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