DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mccc1 and pcca

DIOPT Version :9

Sequence 1:NP_001247391.1 Gene:Mccc1 / 43750 FlyBaseID:FBgn0039877 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001002746.1 Gene:pcca / 437019 ZFINID:ZDB-GENE-040718-246 Length:709 Species:Danio rerio


Alignment Length:713 Identity:276/713 - (38%)
Similarity:411/713 - (57%) Gaps:68/713 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RC------FATEASPKVRPISKILISNRGEIACRVIRTARKLGVRTVAVFSDPDEKSMHTQLADE 72
            ||      ::|...|..:...||||:||||||||||:|.||:|::||||.||.|..::|.::|||
Zfish    25 RCGVIICRYSTVIEPNDKTFDKILIANRGEIACRVIKTCRKMGIKTVAVHSDVDSSAVHVKMADE 89

  Fly    73 SYRVGEAASSASYLRGERILDIAKRSGAQAIHPGYGFLSESVEFAELCQREGIIFMGPPSSAIRD 137
            :..||.|.:|.|||..:.|::..|.:||||:|||||||||:.|||:....||:.|:||.:.||:.
Zfish    90 AVCVGPAPTSKSYLNMDAIMNAIKLTGAQAVHPGYGFLSENKEFAKRLAAEGVTFIGPDTHAIQA 154

  Fly   138 MGIKSTSKAIMAAAGVPIINGYHGDDQSDECLQREADKIGFPLMIKAVRGGGGKGMRIAEKPDDF 202
            ||.|..||.|..||.|..|.|:.|..:..|...:.|.:||:|:||||..||||||||||...::.
Zfish   155 MGDKIESKLIAKAAKVNTIPGFDGVVKDAEEAVKIAGEIGYPVMIKASAGGGGKGMRIAWNDEET 219

  Fly   203 LTALNSARTESEKSFGDSSVLLERYVRSPRHVEVQVFADQYGDAVYLWERDCSVQRRHQKIIEEA 267
            ......:..|:..||||..:|:|:::.:|||:|:||.||::|:|::|.||:||:|||:||::|||
Zfish   220 REGFRFSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLADKHGNALWLNERECSIQRRNQKVVEEA 284

  Fly   268 PAPGLSEDLRRELGEAAVRAAKAVGYVGAGTVEFILDKEDLSFHFMEMNTRLQVEHPITEMITGT 332
            |:..|..|.||::||.||..||||.|..||||||::|.:. :|:|:||||||||||||||.|||.
Zfish   285 PSTFLDPDTRRKMGEQAVSLAKAVKYSSAGTVEFLVDSKK-NFYFLEMNTRLQVEHPITECITGL 348

  Fly   333 DLVEWQIRIAAGEPLPLKQSEITRRGHAFEARIYAENPRGGF-LPGAGPLRYLSTPQPSNNVRVE 396
            ||||..||||.|..|..|||:|...|.|.|:|:|||:|...| ||..|.|.....|...:||||:
Zfish   349 DLVEQMIRIAKGNKLQHKQSDIPINGWAIESRVYAEDPYKSFGLPSIGRLSQYQEPLDLDNVRVD 413

  Fly   397 TGVREGDEVSVHYDPMIAKLVVWGENRTQALNSLVARLGEYHISGLDTNINFLIDLASHPEFQLA 461
            :|::||.::|::|||||:|||.:|:.|.:||..:...|..|.:.|:..||..|.::..||.|...
Zfish   414 SGIQEGSDISIYYDPMISKLVTYGKTREEALKKMEEALDNYVVRGVTHNIPLLREIIVHPRFVSG 478

  Fly   462 NVHTGFIDEQFDTLFPPIIISP---QQVSQAALAL----------VLNELQAAFRNGNKDQDPFV 513
            ::.|.|:.|.:...|...:::.   |::...|.||          .|.:|:.:            
Zfish   479 DISTKFLPEVYPDGFKGHMLTAGERQELLATAAALYTAAQLRSQRFLGDLRVS------------ 531

  Fly   514 ATPNARLNYSLVRRYDLKANEKVYSVAVKFDGEDMQIQVDNGDWQDAKVERVQDGSRLKIRANIN 578
            ..|....::.|.    ::..:.|:.:.|...|....:::              ||.::::....|
Zfish   532 CVPAESSDWELC----VELEKSVHMLGVSRSGNKYTVEI--------------DGEKVQVSGEWN 578

  Fly   579 SNVTTYNASIDGTSVSL----FSESGKVDFEVGQPKFLSAQGDQLGA-------------VGSRI 626
            ......:.:|:|...:|    .:.:|::..:.....|......:|.|             ..|.:
Zfish   579 LASALLSVTINGKHRTLQCLSRTAAGEIILQYLGTSFKLRVLSKLAASLSKHMPEKVPEDTSSIL 643

  Fly   627 VAPMPGILEKVLVKPGDKVKKGENLAVLIAMKMEHILKAPKDATIKSIGGAAGDNVAKGAAVI 689
            .:||||.:..|.|||||.|.:|:.:.|:.||||::.:.|.|.|.:||:...|||.|.:|..::
Zfish   644 RSPMPGSVVAVSVKPGDTVAEGQEICVIEAMKMQNSMTAAKTAKVKSVHCKAGDTVGEGDLLV 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mccc1NP_001247391.1 PccA 27..693 CDD:227111 272/694 (39%)
CPSase_L_chain 27..135 CDD:278706 59/107 (55%)
CPSase_L_D2 141..348 CDD:280881 108/206 (52%)
Biotin_carb_C 362..469 CDD:214878 43/107 (40%)
biotinyl_domain 626..691 CDD:133459 27/64 (42%)
pccaNP_001002746.1 PccA 44..709 CDD:227111 272/694 (39%)
CPSase_L_chain 44..152 CDD:278706 59/107 (55%)
CPSase_L_D2 157..363 CDD:280881 108/206 (52%)
Biotin_carb_C 378..485 CDD:214878 42/106 (40%)
biotinyl_domain 643..708 CDD:133459 27/64 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4770
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D130620at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100368
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.720

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