DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mccc1 and pcca-1

DIOPT Version :9

Sequence 1:NP_001247391.1 Gene:Mccc1 / 43750 FlyBaseID:FBgn0039877 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_509293.1 Gene:pcca-1 / 181026 WormBaseID:WBGene00017864 Length:724 Species:Caenorhabditis elegans


Alignment Length:694 Identity:286/694 - (41%)
Similarity:421/694 - (60%) Gaps:45/694 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PKVRPISKILISNRGEIACRVIRTARKLGVRTVAVFSDPDEKSMHTQLADESYRVGEAASSASYL 86
            ||   ..||||:||||||||||:|||.:|::||||.||.|..|:|.::|||:..||||.::.|||
 Worm    47 PK---FDKILIANRGEIACRVIKTARAMGIKTVAVHSDVDSNSLHVKMADEAVCVGEAPTAKSYL 108

  Fly    87 RGERILDIAKRSGAQAIHPGYGFLSESVEFAELCQREGIIFMGPPSSAIRDMGIKSTSKAIMAAA 151
            |.:|||...:.:||||:|||||||||:.:||...::.|..|:||.|.||.|||.|..||.|..||
 Worm   109 RADRILQAVEDTGAQAVHPGYGFLSENTKFAAELEKAGAKFIGPNSKAILDMGDKIHSKKIATAA 173

  Fly   152 GVPIINGYHGD-DQSDECLQREADKIGFPLMIKAVRGGGGKGMRIAEKPDDFLTALNSARTESEK 215
            .|.:|.||.|: ...|.|::...| ||:|:||||..||||||||:|............::.|:..
 Worm   174 RVSMIPGYDGEIADEDMCVKVSRD-IGYPVMIKASAGGGGKGMRVAWNDKQAREGYRLSKQEAAS 237

  Fly   216 SFGDSSVLLERYVRSPRHVEVQVFADQYGDAVYLWERDCSVQRRHQKIIEEAPAPGLSEDLRREL 280
            ||||..:|:|:::.:|||:|:||..|::|:|::|.||:||:|||:||:|||||:..:..::||::
 Worm   238 SFGDDRMLVEKFIDNPRHIEMQVLCDKHGNALWLNERECSIQRRNQKVIEEAPSSFVPPEMRRKM 302

  Fly   281 GEAAVRAAKAVGYVGAGTVEFILDKEDLSFHFMEMNTRLQVEHPITEMITGTDLVEWQIRIAAGE 345
            ||.||:.||||||..||||||::|.: .:|:|:||||||||||||||.|||.|:|:..:|::.|.
 Worm   303 GEQAVQLAKAVGYDSAGTVEFLVDSQ-RNFYFLEMNTRLQVEHPITECITGIDIVQQMLRVSYGH 366

  Fly   346 PLPLKQSEITRRGHAFEARIYAENPRGGF-LPGAGPLRYLSTPQPSNNVRVETGVREGDEVSVHY 409
            |||:.|.::...|.|||:|:|||:|..|| ||..|.|.....|:..:.||.::|:|||.|:|::|
 Worm   367 PLPITQEQVPLNGWAFESRVYAEDPYKGFGLPSVGRLSRYVEPKHVDGVRCDSGIREGSEISIYY 431

  Fly   410 DPMIAKLVVWGENRTQALNSLVARLGEYHISGLDTNINFLIDLASHPEFQLANVHTGFIDEQFDT 474
            ||:|.|||..|:||.||||.:...|..|.|.|:..||..|.|:.....|:..::.|.::.|.:..
 Worm   432 DPLICKLVTHGDNREQALNRMQEALDNYVIRGVTHNIPLLRDIVQEKRFRTGDITTKYLPEVYPE 496

  Fly   475 LFPPIIISP-QQVSQAALALVLNELQAA----FRNGNKDQDPFVATPNARLNYSLVRRYDLKANE 534
            .|....:|| :|....|.|..||..:.|    |.|.||.:...||:.:.  .|..|....:|..|
 Worm   497 GFQGTSLSPKEQDVVIAFASALNARKLARANQFLNQNKQRSTHVASFSK--TYKFVSSLPVKEGE 559

  Fly   535 K--VYSVAVKF-DGEDMQIQVDNGDWQDAKVERVQDGSRLKIRANINSNVTTYNASIDG---TSV 593
            :  .::|.|:| :|...:.||..|            |..:.|..::|.:....:..:||   |:.
 Worm   560 RPTEHAVEVEFVEGSANKAQVRIG------------GKTVTISGDLNLSHPVNSIEVDGEHITTQ 612

  Fly   594 SLFSESGKVD-FEVGQP-----------KFLSAQGDQLGA-VGSRIVAPMPGILEKVLVKPGDKV 645
            .:...:|::. ...|.|           |:|....::... :.:.:::||||.::.|.|||||.|
 Worm   613 IVGKRAGEITVLYKGTPFKVKVLPEQAVKYLQYMKEKAKVDLSTVVLSPMPGAIKNVNVKPGDMV 677

  Fly   646 KKGENLAVLIAMKMEHILKAPKDATIKSIGGAAGDNVAKGAAVI 689
            .:|:.|.|:.||||::.|.|.|...:|::....|..|.:|..::
 Worm   678 SEGQELVVMEAMKMQNSLHAGKTGRVKAVNVKVGATVDEGEVLV 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mccc1NP_001247391.1 PccA 27..693 CDD:227111 284/689 (41%)
CPSase_L_chain 27..135 CDD:278706 61/107 (57%)
CPSase_L_D2 141..348 CDD:280881 104/207 (50%)
Biotin_carb_C 362..469 CDD:214878 45/107 (42%)
biotinyl_domain 626..691 CDD:133459 25/64 (39%)
pcca-1NP_509293.1 PccA 49..724 CDD:227111 284/689 (41%)
CPSase_L_chain 49..157 CDD:278706 61/107 (57%)
ATP-grasp_4 162..369 CDD:302634 104/208 (50%)
Biotin_carb_C 383..490 CDD:214878 45/106 (42%)
biotinyl_domain 657..723 CDD:133459 25/65 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 131 1.000 Domainoid score I3227
eggNOG 1 0.900 - - E1_COG4770
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D130620at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100368
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2097
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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