DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and UBP8

DIOPT Version :10

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_013950.1 Gene:UBP8 / 855263 SGDID:S000004836 Length:471 Species:Saccharomyces cerevisiae


Alignment Length:469 Identity:122/469 - (26%)
Similarity:192/469 - (40%) Gaps:134/469 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1625 CQLCVPNMKLLTNTLI----DFVCTDTDPLREWDYLPPVGARPTKGFCGLKNAGATCYMNSVLQQ 1685
            |:..:.|:.|:.:.::    |.|||.|       .:|.:..|  .|..||.|.|:||:|:|:||.
Yeast    99 CEDYIGNIDLINDAILAKYWDDVCTKT-------MVPSMERR--DGLSGLINMGSTCFMSSILQC 154

  Fly  1686 LYMVP-AVRVGILRAHG---AATTDGEDFSGDSDLTGGGLGSALFSGPASALVSLPSSSSTIEDG 1746
            |...| .:|..:.:.|.   ...:..:.||...|.....|..||.:..||:     ||:||    
Yeast   155 LIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCALDKIVHELYGALNTKQASS-----SSTST---- 210

  Fly  1747 LHDVRKNYHVVILKHVQAIFAHL-GHSALQYYVPRGLWTHFKLLGEPVNLREQQDAVEFFMSLLE 1810
               .|:...:.:|.....|..:| |:|                         ||||.||:..::.
Yeast   211 ---NRQTGFIYLLTCAWKINQNLAGYS-------------------------QQDAHEFWQFIIN 247

  Fly  1811 SLDEGLKALGQPQ--------------LMNATLGGSFSDQKICQECPHRYSKE--EPFSVFSVDI 1859
            .:.:.. .|..|.              :::....||.....:|..|.:. ||.  :||...|:||
Yeast   248 QIHQSY-VLDLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNN-SKTTIDPFLDLSLDI 310

  Fly  1860 RNHSSLTESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEY---DYER 1921
            ::...|.|.|:.:.|.|.|:..: |||.:|:.....:|::.:.|||.||.:||||||:   ...|
Yeast   311 KDKKKLYECLDSFHKKEQLKDFN-YHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNR 374

  Fly  1922 VCAIKFNDYFEFPRILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYELTGIVVHSGQASGGH 1986
                |.:|:.|||..|:|:.|..:.......|..:|.|        ..|||.|||.|.|..:.||
Yeast   375 ----KLDDFIEFPTYLNMKNYCSTKEKDKHSENGKVPD--------IIYELIGIVSHKGTVNEGH 427

  Fly  1987 YFSYILSKNPANGKC-----QWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYDNNLKRMQYR 2046
            |.::          |     ||:||:|..|:  .:.::|.:|.:                     
Yeast   428 YIAF----------CKISGGQWFKFNDSMVS--SISQEEVLKEQ--------------------- 459

  Fly  2047 RQKRWWNAYMLFYT 2060
                   ||:||||
Yeast   460 -------AYLLFYT 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 112/424 (26%)
DUF3517 2198..2566 CDD:463438
UBP8NP_013950.1 zf-UBP 46..108 CDD:460464 2/8 (25%)
Peptidase_C19D 138..466 CDD:239125 109/419 (26%)
Blue background indicates that the domain is not in the aligned region.

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