DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and UBP13

DIOPT Version :10

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_009486.3 Gene:UBP13 / 852212 SGDID:S000000163 Length:747 Species:Saccharomyces cerevisiae


Alignment Length:475 Identity:114/475 - (24%)
Similarity:181/475 - (38%) Gaps:140/475 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1723 SALFSGPASAL-VSL-PSSSSTIEDGLHD--------------VRKNYHVVILKHVQAIFAHLGH 1771
            |||..||...: .|| .|..:|:...|.|              |..:..|.:||....:|     
Yeast   367 SALIRGPVLNIDHSLNGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLF----- 426

  Fly  1772 SALQYYVPRGLWTHFKLLGEPVNLREQQDAVEFFMSLLESLDE------------GLKALGQP-- 1822
                                  |....|||.|||..||..|.|            .:.:..:|  
Yeast   427 ----------------------NTTMHQDAHEFFNFLLNELSEYIERENKKIAASDINSDSEPSK 469

  Fly  1823 --QLMNATLGGSFSDQKICQECPHRYSKEEPFSVFSVDIR--NHSSLTESLEQYVKGELLEGADA 1883
              ..::....|:.::|..|..|.:..|::|||..|.::::  ..:.:.|.|:.|.:.|:|.|::.
Yeast   470 SKNFISDLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNK 534

  Fly  1884 YHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYFEFPRILDMEPYTVSGLA 1948
            ::||:|.......:.|.:|:||..|.:.||||:|..::.|.||..:...:       |.|::..:
Yeast   535 FYCDECCGLQEAERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHY-------PLTLNVCS 592

  Fly  1949 KLEGEVVEVGDNCQTNVETTKYELTGIVVH-SGQASGGHYFSYILSKNPANGKCQWYKFDDGEVT 2012
            .:..:|      ||      ||||.||||| .|....|||.|  |.|:...|   |..|||..|.
Yeast   593 SINSKV------CQ------KYELAGIVVHMGGGPQHGHYVS--LCKHEKFG---WLLFDDETVE 640

  Fly  2013 ECKMHEDEEMKAECFGGEYMGETYDNNLKRMQYRRQKRWWNAYMLFYTRCDQTPVQYEPSVEQLS 2077
            ..|    ||...| |.||      ..|:.           .||:|||      ...|..:||:  
Yeast   641 AVK----EETVLE-FTGE------SPNMA-----------TAYVLFY------KAMYSNAVEK-- 675

  Fly  2078 LAESRNMVLPLPKPIERSVRHQNIRFLHSRSIFSVEFFNFIKKLVSCNLLSARSNKITPAAEELS 2142
             .:..||.......|:..:::.:                   .|.:||....:..:: |.|::|.
Yeast   676 -NDRENMAKEQDDNIDNLIKYDD-------------------WLRTCNSGQKKKEEL-PIADDLD 719

  Fly  2143 LLGVQLASQFLFHTGFRTKK 2162
               ..:...|:.:|..::.|
Yeast   720 ---TAIDDSFVSNTPIKSSK 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 99/375 (26%)
DUF3517 2198..2566 CDD:463438
UBP13NP_009486.3 Peptidase_C19 141..>165 CDD:470612
Peptidase_C19G 388..666 CDD:239128 91/356 (26%)
Blue background indicates that the domain is not in the aligned region.

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