DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and USP29

DIOPT Version :10

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_065954.1 Gene:USP29 / 57663 HGNCID:18563 Length:922 Species:Homo sapiens


Alignment Length:756 Identity:162/756 - (21%)
Similarity:255/756 - (33%) Gaps:249/756 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1669 GLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGDSDLTGGGLGSALFSGPASAL 1733
            |..|.|.|||||:|||.|:.:|:.                   .|..||.|.....:   |..||
Human   286 GFPNLGNTCYMNAVLQSLFAIPSF-------------------ADDLLTQGVPWEYI---PFEAL 328

  Fly  1734 VSLPSSSSTIEDG---------LHDVRKNYHVVILKHVQAIFAHLGHSALQYYVPRGLWTHFKLL 1789
            :...:....::|.         |.:|:|     ::..|..||:.                     
Human   329 IMTLTQLLALKDFCSTKIKRELLGNVKK-----VISAVAEIFSG--------------------- 367

  Fly  1790 GEPVNLREQQDAVEFFMSLLESLDEGLKALGQPQLMNATL--GGSFSDQK--------------- 1837
                |:  |.||.||....|:.|.|.::.|      ||||  |....|:.               
Human   368 ----NM--QNDAHEFLGQCLDQLKEDMEKL------NATLNTGKECGDENSSPQMHVGSAATKVF 420

  Fly  1838 ----------------ICQECPHRYSKEEPFSVFSVDIRNHS-----SLTESLEQYVKGELLEGA 1881
                            ||:.|.|...|.||.:..|:::...:     |:..||:.:.|.|.||  
Human   421 VCPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELE-- 483

  Fly  1882 DAYHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYFEFPRILDME------ 1940
              |:|..|.:| ..|.|....:|..||.|.|||:.:: .....:|.|:....|:.|.:.      
Human   484 --YNCQMCKQK-SCVARHTFSRLSRVLIIHLKRYSFN-NAWLLVKNNEQVYIPKSLSLSSYCNES 544

  Fly  1941 ---PYTVSGLAKL-EGEVVEVGDNCQTNVETTKYELTGIVVHSGQASGGHYFSYILSKNP-ANGK 2000
               |..:|..|.: :.||:||.   |..:......||..:..:.::|.    |.:|...| .|..
Human   545 TKPPLPLSSSAPVGKCEVLEVS---QEMISEINSPLTPSMKLTSESSD----SLVLPVEPDKNAD 602

  Fly  2001 CQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYDNNLKRMQYRR--QKRWWNAYMLFYTRCD 2063
            .|.::.|.|:.::.:...|.|          .|...::.|...:.|.  :|....|..|......
Human   603 LQRFQRDCGDASQEQHQRDLE----------NGSALESELVHFRDRAIGEKELPVADSLMDQGDI 657

  Fly  2064 QTPVQYEPSVEQLSLAESRNMVLPLPKPIERSVRHQNIRFLHSRSIFSVEFFNFIKKLVSCN-LL 2127
            ..||.||...:.:|..::|.:.:.|    :...:|..::.....:.| || |||.....|.| ..
Human   658 SLPVMYEDGGKLISSPDTRLVEVHL----QEVPQHPELQKYEKTNTF-VE-FNFDSVTESTNGFY 716

  Fly  2128 SARSNKITPAAEELSLLGVQLASQFLFHTGFRTKKSLRGPVMEWYDALSHHIRSSALVRKWFANH 2192
            ..:.|:|...::.::                              :.|...|..|.         
Human   717 DCKENRIPEGSQGMA------------------------------EQLQQCIEESI--------- 742

  Fly  2193 ALLSPPSRLGEYILMAPSPDVRTVFVKLVVFFCHFAINDEPLTGYDGANLCEQVL--ISVLRLLK 2255
                    :.|::..||.|.||.:                     |.....|:.|  .:.|||.|
Human   743 --------IDEFLQQAPPPGVRKL---------------------DAQEHTEETLNQSTELRLQK 778

  Fly  2256 SEAADYGKHLPHYFSLFSMYVG-------LGTREKQQLLRLNV----PLQ---FIQVALDDGPGP 2306
            ::       |.|..:|.|...|       ..||.:.:.|..||    |||   .|.|....|..|
Human   779 AD-------LNHLGALGSDNPGNKNILDAENTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSP 836

  Fly  2307 ----AIKYQYPEFSKLHQVVSHLIRCSDVSEKCQSSNQNAR 2343
                .|...| :|.|......:.:..|::||   :..|.||
Human   837 NSGHYISDVY-DFQKQAWFTYNDLCVSEISE---TKMQEAR 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 101/454 (22%)
DUF3517 2198..2566 CDD:463438 40/166 (24%)
USP29NP_065954.1 PH_USP37_like 4..106 CDD:270122
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..196
UCH 286..552 CDD:425685 76/331 (23%)
Peptidase_C19 <823..883 CDD:239072 14/55 (25%)
Blue background indicates that the domain is not in the aligned region.

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