DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and USP28

DIOPT Version :9

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_001333181.1 Gene:USP28 / 57646 HGNCID:12625 Length:1139 Species:Homo sapiens


Alignment Length:1225 Identity:230/1225 - (18%)
Similarity:396/1225 - (32%) Gaps:474/1225 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1514 LQISEG-------LLGDEIKWLQRIRENVHATGDTQVHEELLEGHLCLAKELMFFLGADSKAQLN 1571
            |:.|.|       ||.||     |::|....|..|:..|  :||. ...||::        |::.
Human    44 LKASNGDITQAVSLLTDE-----RVKEPSQDTVATEPSE--VEGS-AANKEVL--------AKVI 92

  Fly  1572 ELIHELIDDFLFTASREFLHLRRHGSLRQDTVPPPVCRSPHTIAAACDLLIALCQLCVPNMKLLT 1636
            :|.|:..||.                  |..:...:..||...|...||                
Human    93 DLTHDNKDDL------------------QAAIALSLLESPKIQADGRDL---------------- 123

  Fly  1637 NTLIDFVCTDTDPLRE-----WDYLP-PVGARPTKGF-CGLKNAGATCYMNSVLQQLYMVPAVRV 1694
            |.:.:....:|...:.     |...| |...|...|: .||||.|.||:.::|:|.|:.:|..|.
Human   124 NRMHEATSAETKRSKRKRCEVWGENPNPNDWRRVDGWPVGLKNVGNTCWFSAVIQSLFQLPEFRR 188

  Fly  1695 GILRAHGAATTDGEDFSGDSDLTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVIL 1759
            .:|.                           :|.|.:.|.:..|         |..::|  ::.:
Human   189 LVLS---------------------------YSLPQNVLENCRS---------HTEKRN--IMFM 215

  Fly  1760 KHVQAIFAHLGHSALQYYVPRG----LWTHFKLLGEPVNLREQQDAVEFFMSLLESLDEGLKA-- 1818
            :.:|.:||.:..|..::..|..    |...|:...|     :|||..||...||:.|::..:.  
Human   216 QELQYLFALMMGSNRKFVDPSAALDLLKGAFRSSEE-----QQQDVSEFTHKLLDWLEDAFQLAV 275

  Fly  1819 -LGQPQ-----LMNATLGGSFSDQKICQECPHRYSKEEPFSVFSVDIRNHSSLTESLEQYVKGEL 1877
             :..|:     .|.....|:|..:.:.:..|  :...|.|..:.:.:..:.:|.|.||    |.:
Human   276 NVNSPRNKSENPMVQLFYGTFLTEGVREGKP--FCNNETFGQYPLQVNGYRNLDECLE----GAM 334

  Fly  1878 LEGADAYHCD----KCDKKVVTVKRVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYFEFPRILD 1938
            :||      |    ..|..|...:.....||||||..:|.|||::.......|.::..|||:|:.
Human   335 VEG------DVELLPSDHSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHNKLEFPQIIY 393

  Fly  1939 MEPYTVSG----------LAKLEGEV----------VEVG------------------------- 1958
            |:.|....          :.||:.|:          |:.|                         
Human   394 MDRYMYRSKELIRNKRECIRKLKEEIKILQQKLERYVKYGSGPARFPLPDMLKYVIEFASTKPAS 458

  Fly  1959 DNC---------------------QTNVETTK--------------------------------- 1969
            ::|                     ||:.|:|.                                 
Human   459 ESCPPESDTHMTLPLSSVHCSVSDQTSKESTSTESSSQDVESTFSSPEDSLPKSKPLTSSRSSME 523

  Fly  1970 ------------------------------------------------------------YELTG 1974
                                                                        |.|..
Human   524 MPSQPAPRTVTDEEINFVKTCLQRWRSEIEQDIQDLKTCIASTTQTIEQMYCDPLLRQVPYRLHA 588

  Fly  1975 IVVHSGQASGGHYFSYILSKNPANGKCQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYDNN 2039
            ::||.|||:.|||::||.::    .:..|.|::|..|||...   ||::.:.:||          
Human   589 VLVHEGQANAGHYWAYIYNQ----PRQSWLKYNDISVTESSW---EEVERDSYGG---------- 636

  Fly  2040 LKRMQYRRQKRWWNAYMLFYTRCDQTP---VQYEPS-VEQLSLAESRNMVLPLPKPIERSVRHQN 2100
            |:.:         :||.|.|.. |:.|   .:..|: .:|:|..|:      |...::..::..|
Human   637 LRNV---------SAYCLMYIN-DKLPYFNAEAAPTESDQMSEVEA------LSVELKHYIQEDN 685

  Fly  2101 IRFLHSRSIFSVEFFNFIKKLVSCNLLSARSNKITPAAEELSLLGVQLASQFLFHTGFRTKKSLR 2165
            .||......:..|        .||.:....|:..:.:.:..:.....:||..    |.|...|..
Human   686 WRFEQEVEEWEEE--------QSCKIPQMESSTNSSSQDYSTSQEPSVASSH----GVRCLSSEH 738

  Fly  2166 GPVMEWYDALSHHIRSSALVRKWFANHALLS------------PPSRLGEYILMAPSPDVRTVFV 2218
            ..:::  :..:..|.::|...:.....|.||            ..:.|.|.....|.        
Human   739 AVIVK--EQTAQAIANTARAYEKSGVEAALSELKEAEPKKPMPQETNLAEQSEQPPK-------- 793

  Fly  2219 KLVVFFCHFAINDEPLTGYDGANLCEQVLISVLRLL-KSEAADYGKHLPHYFSLFSMYVGLGTRE 2282
                      .||...|....:.:.|..:.||.|:| :|:|..|.:.                  
Human   794 ----------ANDAESTAQPNSEVSEVEIPSVGRILVRSDADGYDEE------------------ 830

  Fly  2283 KQQLLRLNVPLQFIQVAL---------DDGPGPAIKYQYPEFSKLHQV-----VSHLIRCSD--V 2331
                :.|:..:|.:.:|:         |......||..:.|:|:|:|:     .||    ||  :
Human   831 ----VMLSPAMQGVILAIAKARQTFDRDGSEAGLIKAFHEEYSRLYQLAKETPTSH----SDPRL 887

  Fly  2332 SEKCQSSNQNARP-------LSNPFKDPNVAHEELTPLSTECMDLLFNRTGYIKKVIED--TNVG 2387
            ........||..|       |...|.|.|::::|              |:..|.||.:.  ..:|
Human   888 QHVLVYFFQNEAPKRVVERTLLEQFADKNLSYDE--------------RSISIMKVAQAKLKEIG 938

  Fly  2388 DEGLKLLQYCSWENPH-----FSRAVLTEL-LWQCGFAYCHDMRHHTDLLLNILLIDDSWQHHRI 2446
            .:.:.:.:|..|...:     .|..:||.| |:|.|        .:.:.|..::....|      
Human   939 PDDMNMEEYKKWHEDYSLFRKVSVYLLTGLELYQKG--------KYQEALSYLVYAYQS------ 989

  Fly  2447 HNALNGVAEEREGLLETIQRAKTHYQKRAYQIIKCLTQLFHKSPIALQMLHTNSN 2501
             ||...:...|.|:.|::...   |::      |||.:|..|   |..:..||.:
Human   990 -NAALLMKGPRRGVKESVIAL---YRR------KCLLELNAK---AASLFETNDD 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 peptidase_C19C 1666..2064 CDD:239124 107/573 (19%)
UCH 1668..2059 CDD:278850 105/565 (19%)
USP28NP_001333181.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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