DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and usp7

DIOPT Version :10

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:XP_009297739.4 Gene:usp7 / 553758 ZFINID:ZDB-GENE-030131-3656 Length:1130 Species:Danio rerio


Alignment Length:876 Identity:201/876 - (22%)
Similarity:312/876 - (35%) Gaps:253/876 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1653 WDYLPPVGARPTKGFCGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGDSDLT 1717
            ||      ::...|:.||||.||||||||:||.|:....:|    ||.....|:|:|.|      
Zfish   226 WD------SKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLR----RAVYMMPTEGDDSS------ 274

  Fly  1718 GGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGHSALQYYVPRGL 1782
                            .|:|.:                      :|.:|..|.||.    .|.|.
Zfish   275 ----------------KSVPLA----------------------LQRVFYELQHSD----KPVGT 297

  Fly  1783 WTHFKLLG-EPVNLREQQDAVEFFMSLLESLDEGLKALGQPQLMNATLGGSFSDQKI----CQEC 1842
            ....|..| |.::...|.|..|....||::::..:|.    ..:..|:...|..:.:    |:..
Zfish   298 KKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKG----TCVEGTIPKLFRGKMVSYIQCKHV 358

  Fly  1843 PHRYSKEEPFSVFSVDIRNHSSLTESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPV 1907
            .:|..:.|.:....:.|:...::.||.:.||..|.|:|.:.|...:...:... |.|.....||:
Zfish   359 DYRSERIEDYYDIQLSIKGKKNIFESFKDYVAVEQLDGDNKYDAGEHGLQEAE-KGVKFLTFPPI 422

  Fly  1908 LAIQLKRFEYDYERVCAIKFNDYFEFPRILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYEL 1972
            |.:||.||.||.:....||.||.||||..|.::.:......|                :...|.|
Zfish   423 LHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEFLQKPDVK----------------DPANYIL 471

  Fly  1973 TGIVVHSGQASGGHYFSYILSKNP-ANGKCQ-----WYKFDDGEVTECKMHEDEEMKAECFGGEY 2031
            ..::||||...||||..|:   || .:||..     |.||||..|:.|...|..|..   :||  
Zfish   472 HAVLVHSGDNHGGHYVVYL---NPKGDGKVSVTAPIWCKFDDDVVSRCTKEEATEHN---YGG-- 528

  Fly  2032 MGETYDNNLKRMQYRRQKRWWNAYMLFYTRCDQTPVQYEPSVEQLSLAESRNMVLPLPKPIE--- 2093
                :|::|.      .:...|||||.|.|..:.....:| |..:.:.:.....|...|.:|   
Zfish   529 ----HDDDLS------VRHCTNAYMLVYIRESKLSEVLQP-VTDMDIPQQLVERLQEEKRVEAQK 582

  Fly  2094 RSVRHQNIRFLHSRSIFSVEF------------------FNFIKKLVSCNLLSARSNKITPAAEE 2140
            |..|.:...::..:.:...:|                  |..:|.......:...|..:....::
Zfish   583 RKERQEAHLYMQVQMVTEDQFCGHQGNDMYDEEKVKYTVFKVLKSSTLAEFVQNLSQTMGFPQDQ 647

  Fly  2141 LSLLGVQLASQFLFHTGFRTKKSLRGPVMEWYDA--------LSHH---------------IRSS 2182
            :.|..:|..|.       .||:    |.|..|:|        ||.:               ..|.
Zfish   648 MRLWPMQARSN-------GTKR----PAMLDYEADCNKSMIDLSDNENPWTIFLETVDPEMAASG 701

  Fly  2183 ALVRKWFANHALL------SPPSRLGEY---ILMAPSPDVRTVFVKLVVFFCHFA--INDEPLTG 2236
            |.:.|:..:|.::      .|.:|...|   |....|..:|    .|:...|..|  .....|..
Zfish   702 ATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIR----DLLPVMCERAGFQQGTSLIL 762

  Fly  2237 YDGA--NLCEQVL---ISVLRLL-------------------KSE---AADYGKHLPHYFSLF-- 2272
            |:..  ||.|::.   :|:.:.|                   .||   |.||.:.|.|...:.  
Zfish   763 YEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDPENDTSELPTAKDYFRDLYHRVDVIFC 827

  Fly  2273 --------SMYVGLGTR------EKQQLLRLNVP---LQFIQ-VALDDGPGPAIKYQYP------ 2313
                    ...|.|..|      .|....|||..   |||.: ....||||..:::.|.      
Zfish   828 DKTIHNDPGFVVTLSNRMNYFQVAKTVAQRLNTDPMLLQFFKSQGYRDGPGNPLRHNYEGTLRDL 892

  Fly  2314 -EFSKLHQ----VVSHL-IRCSDVSEKCQSSNQNARPLSNPFKDPNVAHEELT--PLSTECM-DL 2369
             :|.|..|    ....| ::.:|.        :|.|.....:.:.....||:|  |....|: ||
Zfish   893 LQFFKPRQPKKLYYQQLKMKITDF--------ENRRSFKAIWLNSMFREEEITLYPDKHGCVRDL 949

  Fly  2370 LFNRTGYIKKVIEDTNVGDEGLKLLQYCSWE 2400
            |..    .||.:|.::.|.|.|:||:..|::
Zfish   950 LEE----CKKAVELSDKGSEKLRLLEIVSYK 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 111/408 (27%)
DUF3517 2198..2566 CDD:463438 61/270 (23%)
usp7XP_009297739.4 None
Blue background indicates that the domain is not in the aligned region.

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