DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and USP47

DIOPT Version :9

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_001317137.1 Gene:USP47 / 55031 HGNCID:20076 Length:1375 Species:Homo sapiens


Alignment Length:557 Identity:134/557 - (24%)
Similarity:209/557 - (37%) Gaps:181/557 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1666 GFCGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGDSDLTGGGLGSALFSGPA 1730
            |:.||.|...|||:||:||.|:|.|..|..:.:      .:.|:...|                 
Human   186 GYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYK------WEFEESEED----------------- 227

  Fly  1731 SALVSLP------------SSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGHSALQYYVPRGLW 1783
             .:.|:|            |....||  ..||.:::               |..:.:      .|
Human   228 -PVTSIPYQLQRLFVLLQTSKKRAIE--TTDVTRSF---------------GWDSSE------AW 268

  Fly  1784 THFKLLGEPVNLREQQDAVEFFMSLLESLDEGLKALGQPQLMNATLGGSFSDQKICQECPHRYSK 1848
                         :|.|..|....:.::|::..|...|..|:|....|...|...|.||.:...:
Human   269 -------------QQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWR 320

  Fly  1849 EEPFSVFSVDIRNH------SSLTESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPV 1907
            .:.:....:.||.:      :|:.|:|..:::.|:|:|.:.|.|::|.||....|.:.....|.:
Human   321 IDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYL 385

  Fly  1908 LAIQLKRFEYDYERVCAIKFNDYFEFPRILDM--------------EPYTVSGLAKLEG------ 1952
            |.:|||||::||..:..||.||...||..|||              |..|.|| |:.||      
Human   386 LTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQTESCTDSG-AENEGSCHSDQ 449

  Fly  1953 --------EVVEVGDNCQTNVETTK------------YELTGIVVHSGQASGGHYFSYILSKNPA 1997
                    :.|:.|...:||..|.|            |||..::||||.|:||||::.|.|.:..
Human   450 MSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDE 514

  Fly  1998 NGKCQWYKFDDGEVTECKMHEDEEMKAECFGGE-----YMGETYDNNLKRMQYRRQKRWWNAYML 2057
                |||.|:|..|:..   ..|::| :..||.     |....:.::.            |||||
Human   515 ----QWYSFNDQHVSRI---TQEDIK-KTHGGSSGSRGYYSSAFASST------------NAYML 559

  Fly  2058 FY-----------TRCDQTP------VQYEPSVEQLSLAESRNMVLPLPKPIERSVRHQNIRFLH 2105
            .|           ...|:.|      ||.|..:|:   .|.|.      :.|||:.....:..||
Human   560 IYRLKDPARNAKFLEVDEYPEHIKNLVQKERELEE---QEKRQ------REIERNTCKIKLFCLH 615

  Fly  2106 SRSIFSVEFFNFIKKLVSCNLLSARSNKITPAAEELS 2142
            .           .|:::..|.|....:|....|.|::
Human   616 P-----------TKQVMMENKLEVHKDKTLKEAVEMA 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 peptidase_C19C 1666..2064 CDD:239124 115/471 (24%)
UCH 1668..2059 CDD:278850 113/453 (25%)
USP47NP_001317137.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..452 7/27 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 840..859
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 880..968
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 983..1024
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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