Protein Alignment faf and Usp1

DIOPT Version :10

• Sequence 1: NP_524612.2
• Gene: faf / 43749
• FlyBaseID: FBgn0005632
• Length: 2778
• Species: Drosophila melanogaster
• Sequence 2: NP_651687.3
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Alignment Length: 604
• Identity: 105/604 - (17%)
• Similarity: 169/604 - (27%)
• Gaps: 247/604 - (40%)

  Fly  1649 PLREWDYLPPVGARPTKGFCGLKNAG---ATC----YMNSVLQQLYMVPAVRVGILRAHGAATTD 1706
            ||:|        ..||.|  |:..||   ||.    |:|:|
  Fly   564 PLKE--------NSPTAG--GITGAGTAHATANSLFYLNTV------------------------ 594

  Fly  1707 GEDFSGDSDLTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGH 1771
              |.||.|..:|....||  ||..|...:||:.....:....|...:  ..:||.
  Fly   595 --DLSGASSTSGSASTSA--SGVVSTSAALPTPPQATKYSSDDEMNS--ATVLKD---------- 643

  Fly  1772 SALQYYVPRGLWTHFKLLGEPVNLREQQDAVEFFMSLLESLDEGLKALGQPQLMNATLGGSFSDQ 1836
                                  .:|.::...|..::...|..||:..|...
  Fly   644 ----------------------KMRLEERIRELNLNFFSSDFEGIVVLTTK-------------- 672

  Fly  1837 KICQECPHRYSKEEPFSVFSVDI----RNHSSLTESLEQYVKG-----ELLEGADAYHCDKCDKK 1892
              |..|.....:::.....||.:    .:::.|.:....|::.     |...|.:.|.|::|...
  Fly   673 --CLSCETITRQKQGMLDISVPVPISGYDNADLQDKPSTYIQNSCITKEYFRGENKYSCNQCTGY 735

  Fly  1893 VVTVKRVCVKKLPPVLAIQLKRFEYDYERV-------------CA-------------------- 1924
            ...::.:..:.||.:|.|||.||....|:|             ||
  Fly   736 TEAIRSISYEVLPRLLVIQLNRFSGGMEKVSTYVPTTFTLPCFCATCCELGEGNKLHVYKLYSVI 800

  Fly  1925 ------IKFNDYFEFPRILDM-EPY---------TVSGLAKLEGEVVEVGDNCQTNVETTKYELT 1973
                  :....|..:...||: ..|         |::....:..:.|...:|...|..::....|
  Fly   801 THVGATLTVGHYIAYTCFLDLASDYVNCPKDRRNTMTNSQTMASQAVPSNENAAPNNGSSSVAST 865

  Fly  1974 GIV-VHSGQASGGHYF------------------------SYILSKNPANG-------------- 1999
            .:: ..|..||.|:..                        :.|:|||..||
  Fly   866 PVIAAASALASSGNILMKKMKFGRSKASSSGDMSKNVKQVNGIISKNITNGIGKLSISTTCQGVN 930

  Fly  2000 -----KCQWYKFDDGEVTECKMHEDEEMKAE-----CFGGEYMGETY------------------ 2036
                 .|...:......|.|....:|.::..     .|||.  |.||
  Fly   931 CCAMRLCCTQQTSSSNSTSCSDFSEESLQNGSNSNLSFGGS--GSTYPTGYGSTGRGGVRANYAH 993

  Fly  2037 -----------DNNLKRMQYRR--------QKRWWNAYMLFYTRCDQTPVQYEPSVEQLSLAESR 2082
                       |:.:|.|..|.        :|.....|:|||.|.|..|.:..|.:...|...
  Fly   994 GGPDPIWYMCDDDKIKAMTQREFEELLSPTRKITITPYLLFYARFDLQPQKATPPMPGSSTTP-- 1056

  Fly  2083 NMVLPLPKPIERSVRHQNI 2101
                |.|...:.|..::|:
  Fly  1057 ----PPPSSAQSSWSNENV 1071

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
faf	NP_524612.2	Ubl1_cv_Nsp3_N-like	<994..1060	CDD:475130
		peptidase_C19C	1666..2064	CDD:239124	92/548 (17%)
		DUF3517	2198..2566	CDD:463438
Usp1	NP_651687.3	Peptidase_C19	308..819	CDD:470612	59/342 (17%)