Protein Alignment faf and usp40

DIOPT Version :9

• Sequence 1: NP_524612.2
• Gene: faf / 43749
• FlyBaseID: FBgn0005632
• Length: 2778
• Species: Drosophila melanogaster
• Sequence 2: XP_001921353.3
• Gene: usp40 / 402834
• ZFINID: ZDB-GENE-060518-5
• Length: 1263
• Species: Danio rerio
• Alignment Length: 484
• Identity: 113/484 - (23%)
• Similarity: 180/484 - (37%)
• Gaps: 127/484 - (26%)

  Fly  1657 PPVGARPTKG---FCGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSG---DSD 1715
            ||    |.:|   .||:||.|.|||:||::|.|...|..|..:...       |.|..|   |.|
Zfish    28 PP----PPRGKIKLCGIKNQGGTCYLNSLIQTLLFTPEFREELFHL-------GPDELGCLADKD 81

  Fly  1716 LTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGHSALQYYVPR 1780
                                .|.:.         ||     ||...:|.:|:||.....|.....
Zfish    82 --------------------KPEAK---------VR-----VIPLELQRLFSHLLLVDEQTASTT 112

  Fly  1781 GL-----WTHFKLLGEPVNLREQQDAVEFFMSLLESLDEGLKALGQPQLMNATLGGSFSDQKICQ 1840
            .|     ||:.:.:|       |||..|....|..:|:..|.......|::....|:..:|..|:
Zfish   113 DLTDSFGWTNNEEMG-------QQDVQELNRILFSALESSLVDTSGSSLIHRLYHGTLVNQITCK 170

  Fly  1841 ECPHRYSKEEPFSVFSVDIRNHSSLTESL-EQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKL 1904
            ||.:...::|.|...:|.:...|.|.|:| ..:|:.|:.||.:.|.|..|.:.|...|...::||
Zfish   171 ECSYISERQEDFLDLTVSVSGVSGLEEALWNMFVEEEMFEGNNLYRCSGCGQLVRAAKSAKLRKL 235

  Fly  1905 PPVLAIQLKRFEYDYERVCAIKFNDYFEFPRILDMEPYTVSGLAKLEGEVVEVGDNC-QTNVETT 1968
            ||.|.|.|.||.:|:.:....|....:.||...::.|:                  | |:|...:
Zfish   236 PPFLTISLLRFNFDFTKCERYKETGSYVFPLTFNLRPF------------------CEQSNWPDS 282

  Fly  1969 K--YELTGIVVHSGQASGGHYFSYILSKNPANGKCQWYKFDDGEVTECKM------HEDEEMKAE 2025
            :  |||..:::|.|...||||..||...:...   .|...::.:..:.|:      ::.||.|.|
Zfish   283 EYSYELFSVIIHKGGCYGGHYHVYIKDIDQLG---HWEAPEEEKNVKMKVKTQKQENKTEERKTE 344

  Fly  2026 ------------------------CFGGEYMGETYDNNLKRMQYRRQKRWWNAYMLFYTRCDQTP 2066
                                    |...:.:|:...|.:.....::.|:.:.:...|
Zfish   345 SENSLETEDPLSVLTGILAQEESKCVLVDQLGQKLLNKIGTPWSKKYKKQYGSISKF-------- 401

  Fly  2067 VQYEPSVEQLSLAESRNMVLPLPKPIERS 2095
            :|..|.|..| ::....:.|....|.|.|
Zfish   402 LQSHPEVFML-ISNGTRVALKAGVPTEAS 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
faf	NP_524612.2	peptidase_C19C	1666..2064	CDD:239124	102/442 (23%)
		UCH	1668..2059	CDD:278850	100/432 (23%)
usp40	XP_001921353.3	Peptidase_C19	37..316	CDD:271592	90/347 (26%)
		UCH_1	39..308	CDD:290159	88/334 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5077
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900