DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and USP17L1

DIOPT Version :10

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_001243802.1 Gene:USP17L1 / 401447 HGNCID:37182 Length:530 Species:Homo sapiens


Alignment Length:454 Identity:114/454 - (25%)
Similarity:168/454 - (37%) Gaps:113/454 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1579 DDFLFTASR-EFLHLRRHGSLRQDTVPPPVCRSPHTIAAACDLLIALCQLCVPNMK-LLTNTLID 1641
            ||.|:.... :|.|..:..|.|.|.....:.|:                 .:|... |.:.|.:|
Human     3 DDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRT-----------------SLPEKSPLSSETRVD 50

  Fly  1642 FVCTDTDP----LREWDYLPPVGARPTKGFCGLKNAGATCYMNSVLQQL-YMVPAVRVGILRAHG 1701
             :|.|..|    |...:.||....||.....||:|.|.|||.|:.||.| |.:|.....:.|.| 
Human    51 -LCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREH- 113

  Fly  1702 AATTDGEDFSGDSDLTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIF 1766
                                 |.....|...:  |.:..:.|...||...   ||:......|..
Human   114 ---------------------SQTCQRPKCCM--LCTMQAHITWALHSPG---HVIQPSQALAAG 152

  Fly  1767 AHLGHSALQYYVPRGLWTHFKLLGEPVNLREQQDAVEFFMSLLESLDE----GLKALG----QPQ 1823
            .|.|                          :|:|..||.|..::::.:    |.|.:.    ...
Human   153 FHRG--------------------------KQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTT 191

  Fly  1824 LMNATLGGSFSDQKICQECPHRYSKEEPFSVFSVDIRNHSSLTESLEQYVKGELLEGADAYHCDK 1888
            |::...||.:..|..|..|.......:|:...::||:...|:.::|||.||.|.|.|.:||||..
Human   192 LIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGL 256

  Fly  1889 CDKKVVTVKRVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYFEFPRILDMEPYTVSGLAKLEGE 1953
            |.::......:.:.....||.:.||||    ..|...|.....::|..|||:||.          
Human   257 CLQRAPASNTLTLHTSAKVLILVLKRF----SDVAGNKLAKNVQYPECLDMQPYM---------- 307

  Fly  1954 VVEVGDNCQTNVETTKYELTGIVVHSG-QASGGHYFSYILSKNPANGKCQWYKFDDGEVTECKM 2016
                   .|.|.....|.|..::||:| ....||||||:.::     :.||||.||.|||.|.:
Human   308 -------SQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQ-----EVQWYKMDDAEVTVCSI 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 93/361 (26%)
DUF3517 2198..2566 CDD:463438
USP17L1NP_001243802.1 Peptidase_C19E 79..373 CDD:239126 93/360 (26%)
HABP4_PAI-RBP1 <417..454 CDD:461421
Blue background indicates that the domain is not in the aligned region.

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