DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and Usp17lb

DIOPT Version :10

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_958811.2 Gene:Usp17lb / 381944 MGIID:3051498 Length:468 Species:Mus musculus


Alignment Length:410 Identity:97/410 - (23%)
Similarity:150/410 - (36%) Gaps:129/410 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1668 CGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGDSDLTGGGLGSALFSGPASA 1732
            |||:|.|.:||:|:.||.|...|.                             |...:.|...|.
Mouse    51 CGLQNTGNSCYLNAALQCLTHTPP-----------------------------LADYMLSQEHSQ 86

  Fly  1733 LVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGHSALQYYVPRGLWTHFKLLGEP-VNL- 1795
            ....|....                    :.|:.||:..|.|.        ||...:.:| .|| 
Mouse    87 TCCSPEGCK--------------------MCAMEAHVTQSLLH--------THSGDVMKPSQNLT 123

  Fly  1796 -----REQQDAVEFFMSLLESLDEG---LKALGQPQLMNAT-----LGGSFSDQKICQECPHRYS 1847
                 |:|:||.||.|..||::.|.   :....:|...:::     .||.:..|..|..|.....
Mouse   124 SAFHKRKQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGWWRSQIKCHHCQGTSY 188

  Fly  1848 KEEPFSVFSVDIRNHSSLTESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPVLAIQL 1912
            ..:||....:||.:..|:.::|:...|.|.|.|.::|:|.:|.:|....|.:.:...|.||.:.|
Mouse   189 SYDPFLDIPLDISSVQSVKQALQDTEKAEELCGENSYYCGRCRQKKPASKTLKLYSAPKVLMLVL 253

  Fly  1913 KRFEYDYERVCAIKFNDYFEFPRILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYELTGIVV 1977
            |||.....:    |.:....:|..||::||    |::..|..:             .|.|..::|
Mouse   254 KRFSGSMGK----KLDRKVSYPEFLDLKPY----LSQPTGGPL-------------PYALYAVLV 297

  Fly  1978 HSG-QASGGHYFSYILSKNPANGKCQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYDNNLK 2041
            |.| ....||||..:.:     |..:|||.||.:||.|.:            ...:.|       
Mouse   298 HEGATCHSGHYFCCVKA-----GHGKWYKMDDTKVTSCDV------------TSVLNE------- 338

  Fly  2042 RMQYRRQKRWWNAYMLFYTR 2061
                       |||:|||.:
Mouse   339 -----------NAYVLFYVQ 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 97/410 (24%)
DUF3517 2198..2566 CDD:463438
Usp17lbNP_958811.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Peptidase_C19E 50..346 CDD:239126 96/407 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..449
Blue background indicates that the domain is not in the aligned region.

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