DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment faf and DUBAI

DIOPT Version :9

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster


Alignment Length:949 Identity:198/949 - (20%)
Similarity:299/949 - (31%) Gaps:374/949 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  1316 PSSSQGTLRAISAKLAVILAREMLSASPEGDRCRTLFSSTLQWSCPDISTIKAVVQLAWASSCGN 1380
            |.|:.|...|...    :|.:.|.:.||.|:...:..|..        ..|||:  ||:..|. :
  Fly    31 PMSANGMANAEEN----VLPKGMDTGSPAGESLNSNRSGK--------RDIKAL--LAYLQSI-D 80

  Fly  1381 LQALGNSSGDFEDEVIV-------PDGQDFSMCKEALEVLTISFILNPSANEALTSDPNWPKFIT 1438
            :...|::.....:.|||       |.|......||  :|..:...| .:.||         ||..
  Fly    81 MPEQGHNVMAICERVIVDLARLQIPRGASCPRLKE--DVCQVGAFL-ATRNE---------KFHQ 133

  Fly  1439 SIVLKNPLRHVRQVASEQLFLASTYCAGDRRPFVYMV---NLLVGALKTLVPQ--YESTCAEFFS 1498
            ...    ||.|.::.::..|.....||   ...|:.:   ..::.|:.:|:.|  .:|:..:..:
  Fly   134 MFY----LRVVYELITKSPFEPPPSCA---VAIVFQLFDSTQILEAVHSLLEQNVQDSSIKKTVN 191

  Fly  1499 VLCRTLSYGCIY-----NWPLQISEGL-------LGDEI-------------------------- 1525
            :||..::| |.:     .|.|.:.:||       |.|||                          
  Fly   192 LLCDWITY-CTFCSTLNLWVLALLKGLRDQGKMALLDEIAMDNIEKLFHVMIFPALRQKAAPVVF 255

  Fly  1526 --------------KWLQRI-RENVHATGDTQVHEEL-LEGHLCLAKELMFFLGADSKAQLNELI 1574
                          |.|.|| |...:....:...:|: ||...||             .||.:|.
  Fly   256 HMLSTINQTPEVFHKILPRIPRVLQYVKNQSTTMDEIGLETKKCL-------------QQLVDLT 307

  Fly  1575 HELI-----DDFLFTASREFLHLRRHGSLRQDTVPPPVCRSPHTIAAACDLLIALCQLCVPNMKL 1634
            ..|:     .|.|:.|:::.|         |...|.|.|             :||.:....|.: 
  Fly   308 SALMLRFYDQDELYVATKKAL---------QTYEPSPNC-------------VALAKAMHENAQ- 349

  Fly  1635 LTNTLIDFVCTDTDPLREWDYLPPVGARPTKGFCGLKNAGATCYMNSVLQQLYMVPAVRVGILRA 1699
                                   |.|.|..:  .||.|.|.|||||||||.|.|.          
  Fly   350 -----------------------PWGRRNAR--VGLVNLGNTCYMNSVLQALAMT---------- 379

  Fly  1700 HGAATTDGEDFSGDSDLTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQA 1764
                    .|||..                    :.|...:|               |:|..||.
  Fly   380 --------SDFSRQ--------------------ILLIECNS---------------VLLMKVQQ 401

  Fly  1765 IFAHLGHSALQYYVPRGLWTHFKLLG--EPVNLRE--QQDAVEFFMSLLESLDE----------- 1814
            ..| |.|.:|:|.:     |..::|.  .|.:...  |||:.||...||:.|.|           
  Fly   402 QIA-LMHHSLRYEL-----TPSRVLNATRPPSFTPGLQQDSSEFLGYLLDLLHEHEINSSSVTGH 460

  Fly  1815 ---------------------------------------------------------------GL 1816
                                                                           ||
  Fly   461 SVGPPKTGREVDDVPALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKPTPTPPATPTKATNGL 525

  Fly  1817 KALGQ-------PQLMNATLGGSFSDQKICQECPHRYSKEEPFSVFSVDI--------RNHSSLT 1866
            |..||       |..::.|..|..|....|..|......|:.|....:..        ..:.|:.
  Fly   526 KQQGQQVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQ 590

  Fly  1867 ESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYF 1931
            :.:|.|...|.|:|.:.|.|.:|.|.....:.:.|.:.|..|.:.||:|:||.:.....|.    
  Fly   591 DLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQKYHFRTKL---- 651

  Fly  1932 EFPRILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYELTGIVVHSGQA-SGGHYFSYIL--S 1993
             ..::...|..||...||         |:.| .:.|..|:|...|||:|.: ..||||::..  :
  Fly   652 -MHKVFHDESVTVKMSAK---------DSLQ-EMSTVHYDLYAGVVHAGYSMDSGHYFTFAADQA 705

  Fly  1994 KNPANGKCQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYDNNLKRMQYRRQKRWWNAYMLF 2058
            ||       ||||:|..||..|   .|||               :||....        ..|:||
  Fly   706 KN-------WYKFNDNVVTHSK---PEEM---------------HNLTSPN--------TPYILF 737

  Fly  2059 YTRC----DQTPVQYEPSVEQLSLAESRNMVLPLPKPIE 2093
            |..|    :...|....|...:|.:..:.:.:||..|::
  Fly   738 YKMCGHSNESNSVTASCSSSMVSGSNDQVVSVPLSPPLK 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 peptidase_C19C 1666..2064 CDD:239124 111/497 (22%)
UCH 1668..2059 CDD:278850 108/486 (22%)
DUBAINP_610784.1 UCH 358..738 CDD:278850 108/486 (22%)
Peptidase_C19H 359..739 CDD:239129 109/486 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456879
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24006
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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