DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and DUBAI

DIOPT Version :10

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster


Alignment Length:949 Identity:198/949 - (20%)
Similarity:299/949 - (31%) Gaps:374/949 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  1316 PSSSQGTLRAISAKLAVILAREMLSASPEGDRCRTLFSSTLQWSCPDISTIKAVVQLAWASSCGN 1380
            |.|:.|...|...    :|.:.|.:.||.|:...:..|..        ..|||:  ||:..|. :
  Fly    31 PMSANGMANAEEN----VLPKGMDTGSPAGESLNSNRSGK--------RDIKAL--LAYLQSI-D 80

  Fly  1381 LQALGNSSGDFEDEVIV-------PDGQDFSMCKEALEVLTISFILNPSANEALTSDPNWPKFIT 1438
            :...|::.....:.|||       |.|......||  :|..:...| .:.||         ||..
  Fly    81 MPEQGHNVMAICERVIVDLARLQIPRGASCPRLKE--DVCQVGAFL-ATRNE---------KFHQ 133

  Fly  1439 SIVLKNPLRHVRQVASEQLFLASTYCAGDRRPFVYMV---NLLVGALKTLVPQ--YESTCAEFFS 1498
            ...    ||.|.::.::..|.....||   ...|:.:   ..::.|:.:|:.|  .:|:..:..:
  Fly   134 MFY----LRVVYELITKSPFEPPPSCA---VAIVFQLFDSTQILEAVHSLLEQNVQDSSIKKTVN 191

  Fly  1499 VLCRTLSYGCIY-----NWPLQISEGL-------LGDEI-------------------------- 1525
            :||..::| |.:     .|.|.:.:||       |.|||                          
  Fly   192 LLCDWITY-CTFCSTLNLWVLALLKGLRDQGKMALLDEIAMDNIEKLFHVMIFPALRQKAAPVVF 255

  Fly  1526 --------------KWLQRI-RENVHATGDTQVHEEL-LEGHLCLAKELMFFLGADSKAQLNELI 1574
                          |.|.|| |...:....:...:|: ||...||             .||.:|.
  Fly   256 HMLSTINQTPEVFHKILPRIPRVLQYVKNQSTTMDEIGLETKKCL-------------QQLVDLT 307

  Fly  1575 HELI-----DDFLFTASREFLHLRRHGSLRQDTVPPPVCRSPHTIAAACDLLIALCQLCVPNMKL 1634
            ..|:     .|.|:.|:::.|         |...|.|.|             :||.:....|.: 
  Fly   308 SALMLRFYDQDELYVATKKAL---------QTYEPSPNC-------------VALAKAMHENAQ- 349

  Fly  1635 LTNTLIDFVCTDTDPLREWDYLPPVGARPTKGFCGLKNAGATCYMNSVLQQLYMVPAVRVGILRA 1699
                                   |.|.|..:  .||.|.|.|||||||||.|.|.          
  Fly   350 -----------------------PWGRRNAR--VGLVNLGNTCYMNSVLQALAMT---------- 379

  Fly  1700 HGAATTDGEDFSGDSDLTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQA 1764
                    .|||..                    :.|...:|               |:|..||.
  Fly   380 --------SDFSRQ--------------------ILLIECNS---------------VLLMKVQQ 401

  Fly  1765 IFAHLGHSALQYYVPRGLWTHFKLLG--EPVNLRE--QQDAVEFFMSLLESLDE----------- 1814
            ..| |.|.:|:|.:     |..::|.  .|.:...  |||:.||...||:.|.|           
  Fly   402 QIA-LMHHSLRYEL-----TPSRVLNATRPPSFTPGLQQDSSEFLGYLLDLLHEHEINSSSVTGH 460

  Fly  1815 ---------------------------------------------------------------GL 1816
                                                                           ||
  Fly   461 SVGPPKTGREVDDVPALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKPTPTPPATPTKATNGL 525

  Fly  1817 KALGQ-------PQLMNATLGGSFSDQKICQECPHRYSKEEPFSVFSVDI--------RNHSSLT 1866
            |..||       |..::.|..|..|....|..|......|:.|....:..        ..:.|:.
  Fly   526 KQQGQQVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQ 590

  Fly  1867 ESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYF 1931
            :.:|.|...|.|:|.:.|.|.:|.|.....:.:.|.:.|..|.:.||:|:||.:.....|.    
  Fly   591 DLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQKYHFRTKL---- 651

  Fly  1932 EFPRILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYELTGIVVHSGQA-SGGHYFSYIL--S 1993
             ..::...|..||...||         |:.| .:.|..|:|...|||:|.: ..||||::..  :
  Fly   652 -MHKVFHDESVTVKMSAK---------DSLQ-EMSTVHYDLYAGVVHAGYSMDSGHYFTFAADQA 705

  Fly  1994 KNPANGKCQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYDNNLKRMQYRRQKRWWNAYMLF 2058
            ||       ||||:|..||..|   .|||               :||....        ..|:||
  Fly   706 KN-------WYKFNDNVVTHSK---PEEM---------------HNLTSPN--------TPYILF 737

  Fly  2059 YTRC----DQTPVQYEPSVEQLSLAESRNMVLPLPKPIE 2093
            |..|    :...|....|...:|.:..:.:.:||..|::
  Fly   738 YKMCGHSNESNSVTASCSSSMVSGSNDQVVSVPLSPPLK 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 111/497 (22%)
DUF3517 2198..2566 CDD:463438
DUBAINP_610784.1 Peptidase_C19H 359..739 CDD:239129 109/486 (22%)
Blue background indicates that the domain is not in the aligned region.

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