DRSC/TRiP Functional Genomics Resources

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Protein Alignment faf and Usp17la

DIOPT Version :10

Sequence 1:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster
Sequence 2:NP_031913.1 Gene:Usp17la / 13531 MGIID:107699 Length:526 Species:Mus musculus


Alignment Length:445 Identity:108/445 - (24%)
Similarity:169/445 - (37%) Gaps:126/445 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1668 CGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGDSDLTGGGLGSALFSGPASA 1732
            |||:|.|.:||:|:.||.|...|.:...:|....:.|....:            |..|.:..|..
Mouse    51 CGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPE------------GCKLCAMEALV 103

  Fly  1733 LVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGHSALQYYVPRGLWTHFKLLGEPVNLRE 1797
            ..||..|.|      .||.|..|::    ..|...|                            :
Mouse   104 TQSLLHSHS------GDVMKPSHIL----TSAFHKH----------------------------Q 130

  Fly  1798 QQDAVEFFMSLLESLDEG---LKALGQPQLMNAT-----LGGSFSDQKICQECPHRYSKEEPFSV 1854
            |:||.||.|..||::.|.   :....:|...:::     .||.:..|..|..|.......:.|..
Mouse   131 QEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLD 195

  Fly  1855 FSVDIRNHSSLTESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEYDY 1919
            ..:||.:..|:.::|....|.|.|.|.:||:|.||.:|:...|.:.|...|.||.:.|.||    
Mouse   196 IPLDISSAQSVKQALWDTEKSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRF---- 256

  Fly  1920 ERVCAIKFNDYFEFPRILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYELTGIVVHSGQAS- 1983
            ......|.:....:|..||::||    |::..|..:             .|.|..::||.|..| 
Mouse   257 SAFTGNKLDRKVSYPEFLDLKPY----LSEPTGGPL-------------PYALYAVLVHDGATSH 304

  Fly  1984 GGHYFSYILSKNPANGKCQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYDNNLKRMQYRRQ 2048
            .||||..:.:     |..:|||.||.:||.|.:            ...:.|              
Mouse   305 SGHYFCCVKA-----GHGKWYKMDDTKVTRCDV------------TSVLNE-------------- 338

  Fly  2049 KRWWNAYMLFYTRCDQTPVQYEPSVEQLS--LAESR-NMVLPLPKPIERSVRHQN 2100
                |||:|||.:        :.:::|:|  :.|.| |.||.....:::|.|.::
Mouse   339 ----NAYVLFYVQ--------QANLKQVSIDMPEGRINEVLDPEYQLKKSRRKKH 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 99/404 (25%)
DUF3517 2198..2566 CDD:463438
Usp17laNP_031913.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Peptidase_C19E 50..346 CDD:239126 98/400 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..394 2/8 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 465..494
Blue background indicates that the domain is not in the aligned region.

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