Protein Alignment faf and Usp17la2

DIOPT Version :10

• Sequence 1: NP_524612.2
• Gene: faf / 43749
• FlyBaseID: FBgn0005632
• Length: 2778
• Species: Drosophila melanogaster
• Sequence 2: XP_038953753.1
• Gene: Usp17la2 / 100910107
• RGDID: 6500127
• Length: 503
• Species: Rattus norvegicus
• Alignment Length: 597
• Identity: 139/597 - (23%)
• Similarity: 207/597 - (34%)
• Gaps: 189/597 - (31%)

  Fly  1669 GLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGDSDLTGGGLGSALFSGPASAL 1733
            ||:|.|.:||:|:|||.|...|.                             |...:.|...|..
  Rat    51 GLQNIGNSCYLNAVLQCLTHTPP-----------------------------LADYMLSQEHSQR 86

  Fly  1734 VSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGHSALQYYVPRGLWTHFKLLGEPVNLREQ 1798
            ...|....                    :.|:.||:..|.|..: ..|:....::|....:...|
  Rat    87 CCYPEGCK--------------------MCAMEAHVTQSLLHSH-SGGVMKPSEILTSTFHKHRQ 130

  Fly  1799 QDAVEFFMSLLESLDEG-LKALGQPQ-------LMNATLGGSFSDQKICQECPHRYSKEEPFSVF 1855
            :||.||.|..|.::.|. |:...|.:       |:....||....|..|..|.......:||...
  Rat   131 EDAHEFLMFTLNAMHESCLRGCKQSETSSKDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNL 195

  Fly  1856 SVDIRNHSSLTESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEYDYE 1920
            .:||.:..|:.::||..||.|.|:|.:||:|.:|.:|:...|...|:....||.:.|.| .||:.
  Rat   196 FLDICSAQSVKQALEDLVKLEELQGDNAYYCGRCREKMPASKTTKVQTASKVLLLVLNR-SYDFG 259

  Fly  1921 RVCAIKFNDYFEFPRILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYELTGIVVHSG-QASG 1984
               ..|.|....:|..||::||.                 .|.......|.|..::||.| ..|.
  Rat   260 ---GDKLNRVVSYPEYLDLQPYL-----------------SQPTAGPLPYALYAVLVHDGVTCSS 304

  Fly  1985 GHYFSYILSKNPANGKCQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYDNNLKRMQYRRQK 2049
            ||||.|:   ..::||  |||.||.:||.|.:            ...:.|.
  Rat   305 GHYFCYV---KASHGK--WYKMDDSKVTRCDV------------SSVLSEP-------------- 338

  Fly  2050 RWWNAYMLFYT-RCDQTPVQYEPSVEQLSLAESRNMVLPLPKPIERSVRHQNIRFLHSRSIFSVE 2113
                ||:|||. :.|...|..:.||.::      :.||. |:..::..|.:.    |.||
  Rat   339 ----AYLLFYVQQTDLEKVNVDVSVGRV------HGVLH-PESQQKKTRKKK----HKRS----- 383

  Fly  2114 FFNFIKKLVSCN--LLSARSNKITPAAEELSL--------LGVQLASQFLFHTGFRTKKSLRGPV 2168
                     ||.  :...|.|:...|.:|.||        ...|.|.|.|..|  :...|..|.|
  Rat   384 ---------SCTEAVHMPRENRENTATKETSLGEGKVLQEQNHQKAGQNLKTT--KVNLSANGTV 437

  Fly  2169 MEWYDALSHHIRSSALVRKWFANHALLSP-----PSRLGEYILMAPSPDVRTVFVKLVVFFCHFA 2228
            :       |..|.:|   .|..|    :|     |...|:.:|....                 :
  Rat   438 I-------HQPRYTA---NWGRN----APDKDDQPGHSGDRLLTTQG-----------------S 471

  Fly  2229 INDEPLTGYDGA 2240
            :|...|.|:.|:
  Rat   472 MNTGQLCGHGGS 483

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
faf	NP_524612.2	Ubl1_cv_Nsp3_N-like	<994..1060	CDD:475130
		peptidase_C19C	1666..2064	CDD:239124	99/404 (25%)
		DUF3517	2198..2566	CDD:463438	7/43 (16%)
Usp17la2	XP_038953753.1	Peptidase_C19E	49..345	CDD:239126	98/399 (25%)