DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2126 and jamp-1

DIOPT Version :10

Sequence 1:NP_001263153.1 Gene:CG2126 / 43748 FlyBaseID:FBgn0039876 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_504568.1 Gene:jamp-1 / 178993 WormBaseID:WBGene00019807 Length:326 Species:Caenorhabditis elegans


Alignment Length:309 Identity:85/309 - (27%)
Similarity:159/309 - (51%) Gaps:28/309 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CPGAYCGRSPL---------------GNNSWSSCGVCPRGSRVNQSYACSPCRDELSTYSWLYLG 59
            |.| :|||:.|               |:.|.|.||.|..|.|.|....|..|...|..|.|:||.
 Worm    15 CLG-FCGRTVLVGNYSEDVEATTTAAGSTSLSRCGPCSFGYRNNAMSICESCDTPLQPYDWMYLL 78

  Fly    60 FMTMLPLMMHCFFIDMDAKDRKFSRKQLILTAS---AFVEVAISAILATLLMEPMWELRLYACDV 121
            |:.:|||::|..||.:   .||:.|.:....:.   ..:|..|:.::|.|:..|.:...|..|..
 Worm    79 FIALLPLLLHMQFIRI---ARKYCRTRYYEVSEYLCVILENVIACVIAVLIYPPRFTFFLNGCSK 140

  Fly   122 RKLTDWYTLFYNPSPNYEARVYCTQEAVYPLQTIVLVFYFLCLVNMFLIRPLVSKIMDVGGRSKA 186
            ..:.:||...|||...|...:.||.|.|:||.:|..:.:.:.:.::.::|..:..::.....:..
 Worm   141 TDIKEWYPACYNPRIGYTKTMRCTYEVVFPLYSITFIHHLILIGSILVLRSTLYCVLLYKTYNGK 205

  Fly   187 PIYSALYFLPLLTFIHALGCGLIYYSFPYLSVAISMVANAIHYSLKLDQTLKALVHSSVWELKNV 251
            |.|:|:..:|:|..|||:..|:::|:|||:.:..|:.|...|.:|:..:.||.::........::
 Worm   206 PFYAAIVSVPILAVIHAVLSGVVFYTFPYILLIGSLWAMCFHLALEGKRPLKEMIVRIATSPTHL 270

  Fly   252 VIIAVHWMLLAYGLTS------LNYHYAFMCLVPFPTLFYILTVRFTDP 294
            :.:::..::|::|:.:      :.|.::|:|:||.|.:||:.|:.|::|
 Worm   271 IFLSITMLMLSFGVIAIIAPLDIPYRWSFLCIVPVPFIFYMATIPFSNP 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2126NP_001263153.1 JAMP 10..294 CDD:398936 84/307 (27%)
jamp-1NP_504568.1 JAMP 15..319 CDD:398936 84/307 (27%)

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