Sequence 1: | NP_001263152.1 | Gene: | sip3 / 43747 | FlyBaseID: | FBgn0039875 | Length: | 626 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_757385.1 | Gene: | SYVN1 / 84447 | HGNCID: | 20738 | Length: | 617 | Species: | Homo sapiens |
Alignment Length: | 646 | Identity: | 305/646 - (47%) |
---|---|---|---|
Similarity: | 401/646 - (62%) | Gaps: | 77/646 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LLSSVCMALTSAVIGFAYYQKQQFYPAVVYITKSNASMGVIYIQFFVIVFMFGKLLSKIFLGTLR 68
Fly 69 AAEFEHLLERFWYALTETCLAFTVFRDDFNPRFVALFTVLLFLKSFHWLAEERVDFMERSPVLGW 133
Fly 134 LFHIRVGSLLTVLGILDYVLLIHAYNSTLVRGPTVQLVFGFEYAILLTVIASTAIKYVLHAAEMR 198
Fly 199 TDTPWENKAVFLLYTELVIGLIKVVLYILFVVIMAKIYALPMFVFRPMFFTIRNFRKALNDVIMS 263
Fly 264 RRAIRNMNTLYPDATPEELRQSDNICIICREDMVNHSKKLPCGHIFHTTCLRSWFQRQQTCPTCR 328
Fly 329 LNILRTP-TVNSTAMPRQGDEAVAAAAGNP--------------IPAAAGV-------------- 364
Fly 365 -QPAGG--VPPPAPTAVVDGNQARADVNVAGGQALPPNFADLFGDASG-LPNGLPNLAGLQIPPP 425
Fly 426 PV-MPMISPFMIPPHFGYLTPLPPPPIPQDLTNFTDEELRAMEGLQRDHIVQRLKLLQNINLMLD 489
Fly 490 SAGIMMSQYQSLSARLQLTAVTPATAVNGSADSSVYDMPSTSATAMAQLETHQVTPTAAASSASP 554
Fly 555 TM---PA-EKVTIEDLGADADEDDIPSTATEAVSIPNSDADFEENSSELGELRKRRLKFLE 611 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sip3 | NP_001263152.1 | HRD1 | 20..>365 | CDD:227568 | 220/374 (59%) |
zf-RING_2 | 287..328 | CDD:290367 | 32/40 (80%) | ||
SYVN1 | NP_757385.1 | Involved in FAM8A1 interaction. /evidence=ECO:0000269|PubMed:28827405 | 1..251 | 154/244 (63%) | |
Necessary and sufficient for SEL1L interaction. /evidence=ECO:0000269|PubMed:28827405 | 1..84 | 46/77 (60%) | |||
HRD1 | 10..>333 | CDD:227568 | 216/322 (67%) | ||
Interaction with p53/TP53. /evidence=ECO:0000269|PubMed:17170702 | 236..270 | 17/33 (52%) | |||
zf-RING_2 | 289..330 | CDD:290367 | 32/40 (80%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 337..375 | 5/37 (14%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 393..453 | 15/60 (25%) | |||
HAF-H domain, necessary to form higher-order Hrd1 complexes. /evidence=ECO:0000303|PubMed:28827405 | 480..535 | 22/56 (39%) | |||
Nha1_C | <528..611 | CDD:285783 | 29/109 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 535..617 | 30/105 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165155265 | |
Domainoid | 1 | 1.000 | 396 | 1.000 | Domainoid score | I757 |
eggNOG | 1 | 0.900 | - | - | E1_COG5243 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 551 | 1.000 | Inparanoid score | I1138 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1478 |
OMA | 1 | 1.010 | - | - | QHG56438 | |
OrthoDB | 1 | 1.010 | - | - | D271732at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004154 | |
OrthoInspector | 1 | 1.000 | - | - | oto89721 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102274 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR22765 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2905 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.720 |