Protein Alignment sip3 and RIN3

DIOPT Version :9

• Sequence 1: NP_001263152.1
• Gene: sip3 / 43747
• FlyBaseID: FBgn0039875
• Length: 626
• Species: Drosophila melanogaster
• Sequence 2: NP_001190515.1
• Gene: RIN3 / 835219
• AraportID: AT5G51450
• Length: 595
• Species: Arabidopsis thaliana
• Alignment Length: 663
• Identity: 147/663 - (22%)
• Similarity: 229/663 - (34%)
• Gaps: 217/663 - (32%)

  Fly    34 ITKSNASMG---------------VIYIQFFV--IVFMFGKLLSKIFLGTLRAAEFEHLLERF-- 79
            ||| |.|:|               :..:..||  |..:....|..:|.|.|.|.|...|:||.
plant    37 ITK-NISLGNSENTLELLLSSHTTIALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLAN 100

  Fly    80 WYALTETCLAFTVFRDDFNPRFVALF-TVLLFLKSFHWLAEERVDFMERSP-VLGWLFHIRVGSL 142
            :.....|.|.|.|.|..|......:: |||..||.|..||.:|:|.:..|| ...|.:.....:|
plant   101 YIIYKGTFLPFVVPRTVFQGVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTYFRVYSAL 165

  Fly   143 LTVLGI-LDYV-LLIHAYNSTLVRGPTVQLVFGFE-YAILLTVIASTAI-------KYVLHAAEM 197
            ..||.. |.:: |.:..||:.   |.:|.|:..|| ..|....:.:..|       .::.|.|..
plant   166 FMVLSTDLCWIKLSLMIYNTV---GSSVYLLLLFEPCGIAFETLQALLIHGFQLLDMWINHLAVK 227

  Fly   198 RTD---------------TPWE-----NKAVFLLYTELVIG---------LIKVVLYILFVVIMA 233
            .:|               ..|:     |...||....||:.         |..:..:::..|:..
plant   228 NSDCQRSKFYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFL 292

  Fly   234 KIYALPMFVFRPMFFTIRNFRKALNDVIMSRRAIRNMNTLYPDATPEELRQSDNICIICREDMVN 298
            .|.||           :.:..|.:...|..|.|:..::....|||.||||..|:.|.||||.|..
plant   293 NIRAL-----------LSSILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAK 346

  Fly   299 HSKKLPCGHIFHTTCLRSWFQR----QQTCPTCR--LNILRTPTVNSTAMPRQGDEAVAAAAGNP 357
             :|:|.|.|:||..|||||..:    ..:|||||  |.:.||   .|.|.|.:|:
plant   347 -AKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRT---ESEANPSRGE---------- 397

  Fly   358 IPAAAGVQPAGGVPPPAPTAVVDGNQARADVNVAGGQALPPNFADLFGDASGLPNGLPNLAGLQI 422
                                            |:..:.|...|.........|..|:
plant   398 --------------------------------VSSDEHLARQFERQNNSVHALTTGM-------- 422

  Fly   423 PPPPVMPMISPFMIPPHFGYLTPLPPPPIPQDLTNFTDEE---LRAMEGLQRDHIVQRLKLL--- 481
                                        .|.:..|||:.:   |..:.|:...|    |.|:
plant   423 ----------------------------FPTETPNFTESDPWRLAFLNGISSSH----LFLMPYR 455

  Fly   482 --------------QNINLMLDSAG---IMMSQYQSLSARLQLTAVTPATAVNGSADSSVYDM-- 527
                          |.::::..|||   :.:.|.|.:...|       |:...|||.:::.|.
plant   456 NSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHL-------ASVGEGSAQTTLDDASW 513

  Fly   528 ------PSTSATAMAQLE---------THQVTPTAAASSASPTMPAEKVTIEDLGADADE---DD 574
                  ||.::|:...:.         .|..|.:.||::.:..:...:...|.|....||   .|
plant   514 GLWPMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANNMASILAMAETVREVLPHVPDEIIFQD 578

  Fly   575 IPSTATEAVSIPN 587
            :..|.:.:|::.|
plant   579 LQRTNSVSVTVNN 591

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sip3	NP_001263152.1	HRD1	20..>365	CDD:227568	106/396 (27%)
		zf-RING_2	287..328	CDD:290367	20/44 (45%)
RIN3	NP_001190515.1	HRD1	57..>382	CDD:227568	93/339 (27%)
		RING	336..382	CDD:238093	22/46 (48%)
		CUE_RIN3_plant	556..593	CDD:270605	8/36 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5243
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D897451at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820