DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and AT5G41430

DIOPT Version :9

Sequence 1:NP_001263152.1 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_198958.1 Gene:AT5G41430 / 834144 AraportID:AT5G41430 Length:161 Species:Arabidopsis thaliana


Alignment Length:71 Identity:24/71 - (33%)
Similarity:36/71 - (50%) Gaps:13/71 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 RRAIRNMNTLYPDATPEELRQSDNI-CIICREDM-----VNHSKKLPCGHIFHTTCLRSWFQRQQ 322
            |.:|..|.  :.|...|..   |.| |.||.|::     :...||  |.|:||.:|:.||.::.:
plant    96 RASIEEME--FKDIEKEGF---DEIGCSICLEELEDGHEIIRIKK--CRHVFHRSCIDSWLKQNR 153

  Fly   323 TCPTCR 328
            :||.||
plant   154 SCPNCR 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_001263152.1 HRD1 20..>365 CDD:227568 24/71 (34%)
zf-RING_2 287..328 CDD:290367 16/46 (35%)
AT5G41430NP_198958.1 zf-RING_2 117..159 CDD:290367 15/43 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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