DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and AT4G05350

DIOPT Version :10

Sequence 1:NP_651894.3 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_192444.1 Gene:AT4G05350 / 825883 AraportID:AT4G05350 Length:206 Species:Arabidopsis thaliana


Alignment Length:85 Identity:27/85 - (31%)
Similarity:39/85 - (45%) Gaps:14/85 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 NFRKALNDVIMSRRAIRNMNTLYPDATPEELRQSDNICIICREDMVNHSK-----KLPCGHIFHT 311
            |..|:|..|::.|.......:|..:..|         |.||.|.:|:..|     ::.|.|:||.
plant   129 NDEKSLRMVLLGRMKAEEFKSLKMETEP---------CSICLESLVSGPKPRDVTRMTCSHVFHN 184

  Fly   312 TCLRSWFQRQQTCPTCRLNI 331
            .||..|.:|:.|||.||..|
plant   185 GCLLEWLKRKNTCPLCRTEI 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_651894.3 HRD1 20..>365 CDD:227568 27/85 (32%)
AT4G05350NP_192444.1 RING_Ubox 156..201 CDD:473075 18/53 (34%)

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