DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sip3 and AT2G35420

DIOPT Version :9

Sequence 1:	NP_001263152.1	Gene:	sip3 / 43747	FlyBaseID:	FBgn0039875	Length:	626	Species:	Drosophila melanogaster
Sequence 2:	NP_181085.2	Gene:	AT2G35420 / 818108	AraportID:	AT2G35420	Length:	254	Species:	Arabidopsis thaliana

Alignment Length:	167	Identity:	42/167 - (25%)
Similarity:	61/167 - (36%)	Gaps:	35/167 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   220 IKVVLY-ILFVVIMAKIYALPM--FVFRPMFFTIRNFRKALNDVI----------MSRRAIRNMN 271
            :.|||. :|..||.|..::|.:  |:...:|.|....|....|:|          :....||:..
plant    23 VTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVATPPENTGLDPFIIRSFP 87

  Fly   272 TL-YPDATPEELRQSDNICIICREDMVNHSKK---LPCGHIFHTTCLRSWFQRQQTCPTCRLNIL 332
            .. |..||.   :.....|.||..:..:....   ..|.|.||:.|:..||:..:|||.||..:
plant    88 VFHYSSATK---KNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCEL- 148

  Fly   333 RTP-------------TVNSTAMPRQGDEAVAAAAGN 356
             .|             ||..|......||.....||:
plant   149 -DPGMIGSGRLESFHNTVTITIQDINHDEENPPTAGS 184

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sip3	NP_001263152.1	HRD1	20..>365	CDD:227568	42/167 (25%)
sip3	NP_001263152.1	zf-RING_2	287..328	CDD:290367	13/43 (30%)
AT2G35420	NP_181085.2	zf-RING_2	102..145	CDD:290367	13/42 (31%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910