DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and Rnf139

DIOPT Version :9

Sequence 1:NP_001263152.1 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_780435.1 Gene:Rnf139 / 75841 MGIID:1923091 Length:668 Species:Mus musculus


Alignment Length:406 Identity:102/406 - (25%)
Similarity:157/406 - (38%) Gaps:86/406 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VVYITKSNASMGVI-YI--------QFFVIVFMFGKLLSKIFL----GTLRAAEFEHLLERFWYA 82
            |.::|:..|...|: ||        .||:....|..::..:.:    .||.......::....:.
Mouse   240 VFWLTRITAQATVLMYILRMANETESFFISWDDFWDVICNLIISGCDSTLTVLGMSAVISSIAHY 304

  Fly    83 LTETCLAF--TVFRDDFNPRFVA--LFTVLLFLKSFHWL-AEERVDFMERS-------------- 128
            |....|||  :...||....|||  ||.:|........| .|||:..:.|:              
Mouse   305 LGLGILAFIGSTEEDDRRLGFVAPVLFFILALQTGLSGLRPEERLIRLSRNMCLLLTAVLHFIHG 369

  Fly   129 ---PVLGWL-------FH-----IRVGSLLTVLGI-LDYVLLIH-AYNSTLVRGPTVQLVFGFEY 176
               |||..|       ||     :.|.:.|.:|.: |.|||..| |.|:.|.      .|..|..
Mouse   370 MTDPVLMSLSASHVSSFHRHFPVLFVSACLFILPVLLSYVLWHHYALNTWLF------AVTAFCV 428

  Fly   177 AILLTVIASTAIKYVLHAAEMRTDTPWENKAVFLLYTELVIGLIKVVLYILFVVIM--------- 232
            .:.|.||.|..: |.|...:...:..||....::.:......:|:    .:|.|:|         
Mouse   429 ELCLKVIVSLTV-YTLFMIDGYYNVLWEKLDDYVYFVRSTGNIIE----FIFGVVMFGNGAYTMM 488

  Fly   233 ----AKIYALPM--FVFRPMFFTIRNFRKALNDVIMSRR-AIRNMNTLYPDATPEELRQSDNICI 290
                :||.|..|  ..:..::..::|..|    ..|:|| |::.:|:| |:.....|::.|::|.
Mouse   489 FESGSKIRACMMCLHAYFNIYLQVKNGWK----TFMNRRTAVKKINSL-PEIKGSHLQEIDDVCA 548

  Fly   291 ICREDMVNHSKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNILRTPTV--NSTAMPRQGDEAVAAA 353
            ||..:....::..||.|.||..|||.|...|.|||.|...:.....:  ||.|....|   ..|.
Mouse   549 ICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDEIKDNSNASNNNG---FIAP 610

  Fly   354 AGNPIPAAAGVQPAGG 369
            ..||.|..|..:.|.|
Mouse   611 NENPNPEEALREDAAG 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_001263152.1 HRD1 20..>365 CDD:227568 100/400 (25%)
zf-RING_2 287..328 CDD:290367 16/40 (40%)
Rnf139NP_780435.1 TRC8_N 19..516 CDD:290425 64/286 (22%)
zf-rbx1 <544..586 CDD:289448 17/41 (41%)
RING 547..589 CDD:238093 17/41 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..668 8/28 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D897451at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6571
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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