DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and si:ch211-207l14.1

DIOPT Version :10

Sequence 1:NP_651894.3 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_690894.4 Gene:si:ch211-207l14.1 / 562414 ZFINID:ZDB-GENE-120215-234 Length:221 Species:Danio rerio


Alignment Length:86 Identity:25/86 - (29%)
Similarity:43/86 - (50%) Gaps:20/86 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 MSRRA-IRNMNTLYPDATPEELRQSDNICIICREDMVNHS---KKLPCGHIFHTTCLRSWFQRQQ 322
            :.|:| .|:.|.:       .:..:|::|:||.:|:....   ::|.|.|.||:.|:..|...:|
Zfish   139 LERKARFRSRNVM-------SMSDADSLCLICHDDLRKGGGVIRELHCSHSFHSECIEEWLWTKQ 196

  Fly   323 TCPTCRLNILRTPTVNSTAMP 343
            |||||..::         |||
Zfish   197 TCPTCHKHV---------AMP 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_651894.3 HRD1 20..>365 CDD:227568 25/86 (29%)
si:ch211-207l14.1XP_690894.4 LNP1 53..181 CDD:464709 11/48 (23%)
RING_Ubox 159..205 CDD:473075 17/45 (38%)

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