Protein Alignment sip3 and rnf139

DIOPT Version :9

• Sequence 1: NP_001263152.1
• Gene: sip3 / 43747
• FlyBaseID: FBgn0039875
• Length: 626
• Species: Drosophila melanogaster
• Sequence 2: NP_001001242.1
• Gene: rnf139 / 407923
• XenbaseID: XB-GENE-488451
• Length: 663
• Species: Xenopus tropicalis
• Alignment Length: 352
• Identity: 88/352 - (25%)
• Similarity: 136/352 - (38%)
• Gaps: 77/352 - (21%)

  Fly     1 MQLLLSSVCMALTSAVIGFAYYQKQQFYPAVVYITKSNASMG-VIYIQFFVIVFMFGKLLSKIFL 64
            |..::||:...|...::.|....:::           :..:| |..:.||::....|       |
 Frog   290 MSAVISSIAHYLGLGILAFIGSTEEE-----------DKRLGFVAPVLFFILALQTG-------L 336

  Fly    65 GTLRAAEFEHLLERFWYALTETCLAFTVFRDDFNPRFVALFT--VLLFLKSFHWLAEERVDFMER 127
            ..|:..      ||........||..|...     .|:...|  ||:.|.:.|..:..|     .
 Frog   337 SGLKPE------ERLVRLCRNMCLLLTAVL-----HFIHGMTDPVLMSLSASHVSSYRR-----H 385

  Fly   128 SPVLGWLFHIRVGSLLTVLGILDYVLLIHAY--NSTLVRGPTVQLVFGFEYAILLTVIASTAIKY 190
            .|||      .|...|.||.:|...:|.|.|  |:.|.      .|..|...:.|.||.|..: |
 Frog   386 LPVL------LVSVCLFVLPVLLSCVLWHYYALNTWLF------AVTAFCVELCLKVIVSLTV-Y 437

  Fly   191 VLHAAEMRTDTPWENKAVFLLYTELVIGLIKVVLYILFVVIM-------------AKIYALPMFV 242
            .|...:......||....::.|......:|:    .:|.|||             :||.|..|.:
 Frog   438 TLFMIDGYYSVLWEKLDDYVYYVRSTGSIIE----FIFGVIMFGNGAYTMMFESGSKIRACMMCL 498

  Fly   243 FRPMFFTIRNFRKALN--DVIMSRR-AIRNMNTLYPDATPEELRQSDNICIICREDMVNHSKKLP 304
            .  .:|.|  :.:|.|  ...|:|| |::.:|:| |:....|.|:.|::|.||.::....::..|
 Frog   499 H--AYFNI--YLQAKNGWKTFMNRRKAVKKINSL-PEVKGSESREIDDVCAICYQEFHTSARITP 558

  Fly   305 CGHIFHTTCLRSWFQRQQTCPTCRLNI 331
            |.|.||..|||.|...|.|||.|...:
 Frog   559 CHHYFHALCLRKWLYIQDTCPMCHQKV 585

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sip3	NP_001263152.1	HRD1	20..>365	CDD:227568	83/333 (25%)
		zf-RING_2	287..328	CDD:290367	16/40 (40%)
rnf139	NP_001001242.1	TRC8_N	13..512	CDD:372682	61/276 (22%)
		RAD18	527..>661	CDD:227719	22/60 (37%)
		RING-H2_RNF139	541..582	CDD:319597	16/40 (40%)
		RING-H2 finger (C3H2C3-type)	543..581	CDD:319597	16/37 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D897451at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6571
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.950