DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and chfr

DIOPT Version :9

Sequence 1:NP_001263152.1 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_989378.1 Gene:chfr / 395009 XenbaseID:XB-GENE-998659 Length:626 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_001263152.1 HRD1 20..>365 CDD:227568
zf-RING_2 287..328 CDD:290367
chfrNP_989378.1 FHA 31..99 CDD:238017
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..170
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..229
rad18 247..>465 CDD:273165
RING-HC_CHFR 263..306 CDD:319417
RING-HC finger (C3HC4-type) 267..305 CDD:319417
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..387
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 402..428
zf-CRD 426..582 CDD:375461
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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