DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and rnf145b

DIOPT Version :10

Sequence 1:NP_651894.3 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_956057.1 Gene:rnf145b / 327056 ZFINID:ZDB-GENE-030131-5264 Length:685 Species:Danio rerio


Alignment Length:405 Identity:92/405 - (22%)
Similarity:162/405 - (40%) Gaps:114/405 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLLSSV--CMALTSAVIGFAYYQKQQFYPAVVYITKSNASMGVIYIQFFVIVFMFGKLLSKIFLG 65
            |.|:|:  |.:...:::|..:             |.|..::||:             .|.|.:|.
Zfish   262 LFLTSIAECCSTPYSLLGLVF-------------TVSFVALGVL-------------TLCKFYLQ 300

  Fly    66 TLRAAEFEHLLERFWYALTETCLAFTVFRDDFNPRFVALFTVLLFLKSFHWLAEERVDFMERSPV 130
            ..||...::.:.|   .:||   ..|:.       .:|:.|.|:.|:..|           |:.:
Zfish   301 GYRAFMNDNAMHR---GMTE---GITLL-------ILAVQTGLIELQVIH-----------RAFL 341

  Fly   131 LGWLFHIRVGSLL-TVLGILD-------------------------YVLLIHAYNSTLVRGPTVQ 169
            |..:..|.|.|:| ::|.|.|                         ::|:..||.:.::    .|
Zfish   342 LSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMI----CQ 402

  Fly   170 LVFGFEYAILLTVIAS---------TAIKYVLHAAEMRTDTPWENKAVFLLYTELVIGLIKVVLY 225
            . |..::.:|:.:.:|         |.:.|||...|.....|.||....:.|   |.|..:::.:
Zfish   403 F-FRMDFWLLIIISSSILTSLQVLGTLLIYVLFMVEEFRKAPVENMDEVIYY---VNGTYRLLEF 463

  Fly   226 ILFVVIMAKIYALPMF----VFRPMFFTIRNF-----RKAL--NDVIMSRRAIRNMNTLYPDATP 279
            ::.|.::|...:..:|    |.......:.::     |..|  ...::.|.|:..:.:: |.|:.
Zfish   464 LVAVCVVAYGVSETLFGEWTVMGSTIILVHSYYNVWLRAQLGWQSFLLRRDAVHKIQSM-PTAST 527

  Fly   280 EELRQSDNICIICREDMVNHSKKLPCGHIFHTTCLRSWFQRQQTCPTC--RLNILRTPTVNSTAM 342
            .:|:|.::||.||.:|| ..:...||.|.||..||:.|...|:|||.|  :|.....|| :|...
Zfish   528 LQLQQHNDICSICFQDM-KSAVITPCSHFFHAACLKKWLYVQETCPLCHGQLKSQLQPT-SSPGT 590

  Fly   343 PRQGDEAVAAAAGNP 357
            |.||   ..||..||
Zfish   591 PTQG---TPAANQNP 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_651894.3 HRD1 20..>365 CDD:227568 87/386 (23%)
rnf145bNP_956057.1 TRC8_N 8..506 CDD:463960 56/301 (19%)
RING-H2_RNF145 533..575 CDD:319598 18/42 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 582..685 10/25 (40%)

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