DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and dpy

DIOPT Version :10

Sequence 1:NP_651894.3 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster


Alignment Length:304 Identity:59/304 - (19%)
Similarity:90/304 - (29%) Gaps:106/304 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 PTCRLNILRTPTVNSTAMPRQGD--EAVAAAAGNPIPAAAGVQPAGGVPPP--APTAVVDGNQAR 385
            |..|..|...|:|.....|.:..  :.|...|..|.|...|:.....:|.|  .||:.|      
  Fly 19240 PAPRPVIHNIPSVPQPTYPHRNPPIQDVTYPAPQPSPPVPGIVNIPSLPQPVSTPTSGV------ 19298

  Fly   386 ADVNVAGGQALPPNFADLFGDASGLPN-GLPNLAGLQIPPP----------PVMPMISPFMIPPH 439
              :|:. .||.||         ..:|. |:.|:..:..|.|          |.:|  .|....|.
  Fly 19299 --INIP-SQASPP---------ISVPTPGIVNIPSIPQPTPQRPSPGIINVPSVP--QPIPTAPS 19349

  Fly   440 FGYLT-PLPPPPIPQDLTNFTDEELRAMEGLQRDHIVQRLKLLQNINLMLDSAGIMMSQYQSLSA 503
            .|.:. |..|.|:|.                                   .:.|::....|.   
  Fly 19350 PGIINIPSVPQPLPS-----------------------------------PTPGVINIPQQP--- 19376

  Fly   504 RLQLTAVTPATAVN--GSADSSVYDMPSTSATAM----AQLETHQVTPTAAA----SSASPTMPA 558
                   ||...|.  |..:......|||..|..    .|.||.:..||...    |.:.||.|.
  Fly 19377 -------TPPPLVQQPGIINIPSVQQPSTPTTQHPIQDVQYETQRPQPTPGVINIPSVSQPTYPT 19434

  Fly   559 EKVTIED---------------LGADADEDDIPSTATEAVSIPN 587
            :|.:.:|               :...:....:||.....:::|:
  Fly 19435 QKPSYQDTSYPTVQPKPPVSGIINIPSVPQPVPSLTPGVINLPS 19478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_651894.3 HRD1 20..>365 CDD:227568 11/41 (27%)
dpyNP_001260032.1 EGF_3 137..166 CDD:463759
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:463759
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
Herpes_BLLF1 <4032..4489 CDD:282904
Herpes_BLLF1 <4334..4797 CDD:282904
PHA03255 4845..>5021 CDD:165513
DUF5585 4959..5356 CDD:465521
PHA03247 <5170..5799 CDD:223021
PRK12495 <5749..5877 CDD:183558
PHA03247 <5865..6485 CDD:223021
Chi1 6385..>6609 CDD:442692
Herpes_BLLF1 <6607..7102 CDD:282904
Herpes_BLLF1 <7027..7490 CDD:282904
DUF5585 7550..7954 CDD:465521
DUF5585 7881..>8130 CDD:465521
Atrophin-1 18652..>19081 CDD:460830
PHA03247 <18873..19514 CDD:223021 59/304 (19%)
ZP 22576..22811 CDD:214579
Blue background indicates that the domain is not in the aligned region.

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