Protein Alignment sip3 and Rnf139

DIOPT Version :9

• Sequence 1: NP_001263152.1
• Gene: sip3 / 43747
• FlyBaseID: FBgn0039875
• Length: 626
• Species: Drosophila melanogaster
• Sequence 2: NP_001121017.1
• Gene: Rnf139 / 315000
• RGDID: 1306670
• Length: 656
• Species: Rattus norvegicus
• Alignment Length: 355
• Identity: 91/355 - (25%)
• Similarity: 140/355 - (39%)
• Gaps: 71/355 - (20%)

  Fly     3 LLLSSVCMALT----SAVI-GFAYYQKQQFYPAVVYITKSNASMG-VIYIQFFVIVFMFGKLLSK 61
            |::|.....||    |||| ..|:|........:....:.:..:| |..:.||::....|
  Rat   268 LIISGCDSTLTVLGMSAVISSIAHYLGLGILAFIGSTEEDDRRLGFVAPVLFFILALQTG----- 327

  Fly    62 IFLGTLRAAEFEHLLERFWYALTETCLAFTVFRDDFNPRFVALFT--VLLFLKSFHWLAEERVDF 124
              |..||..|....|.|      ..||..|...     .|:...|  ||:.|.:.|..:     |
  Rat   328 --LSGLRPEERLIRLSR------NMCLLLTAVL-----HFIHGMTDPVLMSLSASHVSS-----F 374

  Fly   125 MERSPVLGWLFHIRVGSLLTVLGI-LDYVLLIH-AYNSTLVRGPTVQLVFGFEYAILLTVIASTA 187
            ....|||      .|.:.|.:|.: |.|||..| |.|:.|.      .|..|...:.|.||.|..
  Rat   375 HRHFPVL------FVSACLFILPVLLSYVLWHHYALNTWLF------AVTAFCVELCLKVIVSLT 427

  Fly   188 IKYVLHAAEMRTDTPWENKAVFLLYTELVIGLIKVVLYILFVVIM-------------AKIYALP 239
            : |.|...:...:..||....::.:......:|:    .:|.|:|             :||.|..
  Rat   428 V-YTLFMIDGYYNVLWEKLDDYVYFVRSTGNIIE----FIFGVVMFGNGAYTMMFESGSKIRACM 487

  Fly   240 M--FVFRPMFFTIRNFRKALNDVIMSRR-AIRNMNTLYPDATPEELRQSDNICIICREDMVNHSK 301
            |  ..:..::..::|..|    ..|:|| |::.:|:| |:.....|::.|::|.||..:....::
  Rat   488 MCLHAYFNIYLQVKNGWK----TFMNRRTAVKKINSL-PEIKGSHLQEIDDVCAICYHEFTTSAR 547

  Fly   302 KLPCGHIFHTTCLRSWFQRQQTCPTCRLNI 331
            ..||.|.||..|||.|...|.|||.|...:
  Rat   548 ITPCNHYFHALCLRKWLYIQDTCPMCHQKV 577

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sip3	NP_001263152.1	HRD1	20..>365	CDD:227568	83/333 (25%)
		zf-RING_2	287..328	CDD:290367	16/40 (40%)
Rnf139	NP_001121017.1	TRC8_N	7..504	CDD:290425	64/275 (23%)
		zf-rbx1	<532..574	CDD:289448	17/41 (41%)
		RING	535..577	CDD:238093	17/41 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5243
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D897451at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820