DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and AMFR

DIOPT Version :9

Sequence 1:NP_001263152.1 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001310441.1 Gene:AMFR / 267 HGNCID:463 Length:675 Species:Homo sapiens


Alignment Length:684 Identity:156/684 - (22%)
Similarity:256/684 - (37%) Gaps:213/684 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 YITKSNASMGVIYIQFFVIVFMFGKLLSKIFLGTLRAAEFEHLLERFWYALTETCLAFTVFRDDF 97
            |:...:..:.|:......::.:..||:..|..|.||.:|.:||.::||        .|..:    
Human    76 YLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFW--------NFIFY---- 128

  Fly    98 NPRFVALFTV------------------LLFLKSFHWLAEERVDFMERSPVLGWLFHIRVGSLL- 143
              :|:.:|.|                  |:||.....|.::|.:::..||......|.||.||| 
Human   129 --KFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLV 191

  Fly   144 ----------TVLGILDYVLLIHAYNSTLVRGPTVQLVFGFEYAILLTV-IASTAIKYVLHAAEM 197
                      .|..|..|...:|.            |.|....::|:|| .|...::||:|..::
Human   192 AMLLSCCGLAAVCSITGYTHGMHT------------LAFMAAESLLVTVRTAHVILRYVIHLWDL 244

  Fly   198 RTDTPWENKAVFLLYTELVIGLIKVVL-------YILFVVIMAKIYALPMFV-FRPMFFTI-RNF 253
            ..:..||.|..::.||:.|:.|..:.|       .:||..|...:.:|.:|: .|.:|..: |..
Human   245 NHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRI 309

  Fly   254 RKALNDVIMSRRAIRNMNTLYPDATPEELRQSDNICIICREDMVNHSKKLPCGHIFHTTCLRSWF 318
            |:..|.:    |.:.||...:..||||||..:::.|.||.:.| ..::||||||:||.:|||||.
Human   310 RRHKNYL----RVVGNMEARFAVATPEELAVNNDDCAICWDSM-QAARKLPCGHLFHNSCLRSWL 369

  Fly   319 QRQQTCPTCR--LNILRTPTVNSTAMPRQGDE---AVAAAAGNP-------------IPAAAGVQ 365
            ::..:|||||  |||.....|.........||   .||||.|.|             ..::..|.
Human   370 EQDTSCPTCRMSLNIADNNRVREEHQGENLDENLVPVAAAEGRPRLNQHNHFFHFDGDDSSMRVT 434

  Fly   366 PAGGVPPPAPTAVVDGNQARADVNVAGGQALPPNFADLFGD-ASGLPN------GLPNLAGLQIP 423
            ....||......|||.:               .:..||:.. ||.||:      ...|:.|    
Human   435 APEDVPVGQEVEVVDSD---------------TDAPDLWSRIASWLPSFSVEVMHTTNILG---- 480

  Fly   424 PPPVMPMISPFMIPPHFGYLTPLPPPPIPQDLTNFTDEELRAMEGLQRD-------HIV-QRLKL 480
                                           :|..::.:|.||....::       |:| |.|:|
Human   481 -------------------------------ITQASNSQLNAMAHQIQEMFPQVPYHLVLQDLQL 514

  Fly   481 LQNINLMLDSAGIMMSQYQSLSARLQLTAVTPAT-----AVNGSAD--SSVYDMPSTSATAMAQL 538
            .:::.:..|:.         |..|:|:...|..:     |:|...:  ||..:...|||      
Human   515 TRSVEITTDNI---------LEGRIQVPFPTQRSDSIRPALNSPVERPSSDQEEGETSA------ 564

  Fly   539 ETHQVTPTAAASSASPTMPAEKVTIEDLGADADEDDIPSTATEAVSIPNSDADFEENSSELGE-- 601
            :|.:| |...:.....|:...:|.:|                     |:...|||...|...:  
Human   565 QTERV-PLDLSPRLEETLDFGEVEVE---------------------PSEVEDFEARGSRFSKSA 607

  Fly   602 --------------LRKRRLKFLEERNKSAATNE 621
                          |::.|.:||.:.::..|.:|
Human   608 DERQRMLVQRKDELLQQARKRFLNKSSEDDAASE 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_001263152.1 HRD1 20..>365 CDD:227568 104/388 (27%)
zf-RING_2 287..328 CDD:290367 20/40 (50%)
AMFRNP_001310441.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1478
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D271732at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.770

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