DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and Chfr

DIOPT Version :9

Sequence 1:NP_001263152.1 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001276506.1 Gene:Chfr / 231600 MGIID:2444898 Length:664 Species:Mus musculus


Alignment Length:328 Identity:65/328 - (19%)
Similarity:93/328 - (28%) Gaps:126/328 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 PDATPEELRQSDNICIICREDMVNHSKKL-PCGHIFHTTCLRSWFQRQQTCPTCRL---NILRTP 335
            ||...|.|     .|||| :|:::....| ||.|.|...|...|.:|...|||||.   .|.:..
Mouse   294 PDKMEETL-----TCIIC-QDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNH 352

  Fly   336 TVNSTAMPRQGDEAVAAAAGNPIPAAAGVQPAGGVPPPAPTAVVDGNQARADV------NVAGGQ 394
            .:|                 |.:.|.....|             |.:::..||      |.....
Mouse   353 ILN-----------------NLVEAYLIQHP-------------DKSRSEEDVRSMDARNKITQD 387

  Fly   395 ALPPNFADLFGDASGLPNGLPNLAGLQIPPPPV-MPMISPFMIPPHFGYLTPLPPPPIPQDLTNF 458
            .|.|.....|.|..|....|..|:.:......: .|.|.....|.:........|.|:|:     
Mouse   388 MLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYIVCRQCPEYRRQAVQSLPCPVPE----- 447

  Fly   459 TDEELRAMEGLQRDHIVQRLKLLQNINLMLDSAGIMMSQYQSLSARLQLTAVTPATAVNGSADSS 523
                                                    ..|.|.|         |:.|.|   
Mouse   448 ----------------------------------------SELGATL---------ALGGEA--- 460

  Fly   524 VYDMPSTSATAMAQLETHQVTPTAAASSASPTMPAEKV------TIEDLGADADEDDIPSTATEA 582
                |||||:          .||||.....|...:..:      .:.|..|:.::|  |..|.:.
Mouse   461 ----PSTSAS----------LPTAAPDYMCPLQGSHAICTCCFQPMPDRRAEREQD--PRVAPQQ 509

  Fly   583 VSI 585
            .::
Mouse   510 CAV 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_001263152.1 HRD1 20..>365 CDD:227568 26/93 (28%)
zf-RING_2 287..328 CDD:290367 16/41 (39%)
ChfrNP_001276506.1 FHA 16..105 CDD:238017
FHA <27..140 CDD:224630
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..220
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..264
RING 302..345 CDD:238093 18/43 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..413 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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