DRSC/TRiP Functional Genomics Resources

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Protein Alignment sip3 and zmp:0000000662

DIOPT Version :9

Sequence 1:NP_001263152.1 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_001342512.2 Gene:zmp:0000000662 / 100002825 ZFINID:ZDB-GENE-130530-665 Length:700 Species:Danio rerio


Alignment Length:483 Identity:114/483 - (23%)
Similarity:172/483 - (35%) Gaps:156/483 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLLSSVCMALTSAVIGF--------AYYQKQQFYPAV--VYITKSNASMGV---------IYIQF 48
            |.||||.|.:|.|.:..        .|...:..|..:  :.:|:....|.|         :.:.|
Zfish   164 LTLSSVSMMITGAEVAIFLLANFFVPYRLARTTYREIMDIEVTELYRLMAVGVSLWHGFAVPVLF 228

  Fly    49 FVIVF-MFGKLLSKIFLGTLRAAEFEHLLERFWYALT---ETC------LAFTVFRDDFNPRFVA 103
            .|..| :||..|...| ||:.|.:...||    |.||   |.|      |..|         ||.
Zfish   229 SVFWFVLFGVQLITNF-GTITAVQQGPLL----YLLTSVSECCASPYSLLGLT---------FVV 279

  Fly   104 LFTVL-------LFLKSFHWLAEERVDFMERSPVLGWLFHIRVGSLLTVL--GILD--------- 150
            .:|.|       .:|..|:.|....|  |.|....|      |..||..|  |:||         
Zfish   280 SYTALGLLSLCKFYLGGFNALQNHNV--MHRGVTEG------VTLLLLALQTGLLDMAALQRCFL 336

  Fly   151 -YVLLIHAYNSTL-------------------------VRGPT---------------VQLVFGF 174
             :::|.....|||                         :||.:               :...|..
Zfish   337 LFIILFIVLTSTLQSMSEITEPVVLGLGASRNRSVWKHLRGLSMCGFLLLFPGFMAYKISQFFNM 401

  Fly   175 EYAILLTV---------IASTAIKYVLHAAEMRTDTPWENKAV----FLLYTELVIGLIKVVLYI 226
            ::.:|:.|         :..|.:.|.|...|:     |...|:    .::|  .|.|:.:|:.:.
Zfish   402 DFWLLILVSSCMLTSLQVTGTLLIYSLFMVEV-----WRGSALPGLDEIVY--YVNGVCRVLEFA 459

  Fly   227 LFVVIMA-----------KIYALPMFVFRPMFFTIRNFRKALNDVIMSRRAIRNMNTLYPDATPE 280
            :.|.::|           ......:.:...........:......::.:.|.|.:|.| |.|:.|
Zfish   460 VAVCVVAYGAWESLWGEWSWMGASVIIIHSYCNVWLRAQAGWKSFLLRQEAARKINIL-PKASAE 523

  Fly   281 ELRQSDNICIICREDMVNHSKKLPCGHIFHTTCLRSWFQRQQTCPTCRLNILRTPTVNSTAMPRQ 345
            :|:..:::|.||.:||.: :....|||.||..|||.|...|:|||.|..:|  .||. |.|.|  
Zfish   524 QLQDHNDVCAICFQDMTS-AVITYCGHFFHGNCLRKWLYVQETCPMCHTSI--KPTA-SPAAP-- 582

  Fly   346 GDEAVAAAAGNPIPAAAGVQPAGGVPPP 373
            .|||..|...:|        ||...|||
Zfish   583 ADEAQPAQPNSP--------PAEEEPPP 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip3NP_001263152.1 HRD1 20..>365 CDD:227568 101/448 (23%)
zf-RING_2 287..328 CDD:290367 18/40 (45%)
zmp:0000000662XP_001342512.2 TRC8_N 5..501 CDD:290425 71/365 (19%)
zf-rbx1 <529..570 CDD:289448 18/41 (44%)
RING 532..573 CDD:238093 19/41 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590379
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D897451at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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