DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and actP

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_418491.1 Gene:actP / 948575 ECOCYCID:EG11942 Length:549 Species:Escherichia coli


Alignment Length:508 Identity:99/508 - (19%)
Similarity:203/508 - (39%) Gaps:78/508 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VLATAATVVPDSQFVFNATD-------------YGVFALVLSISAAIGVYFGFFAKGEDTTEEYL 60
            ||...|..:|   |..||.|             ..:...::.:...:|:.: :.:|...:..:|.
E. coli     4 VLTALAATLP---FAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITY-WASKRVRSRSDYY 64

  Fly    61 MGGKRMKTIPIAISLVASQLSAISIMTIPAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNN 125
            ..|..:......:::....:||.|.:.|.|.::..|.:.:...:..::..|::.:|:.....|  
E. coli    65 TAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRN-- 127

  Fly   126 ITNCYEYLEMRFCR----KVRVLQTF-IFILTMFFMLPIFI---FLPSLAFAQVTGFNVHLINTV 182
             ...|.:.::...|    .:|:|... ..::...:::...:   .|..|.|    |.|.|:...:
E. coli   128 -LGRYTFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLF----GLNYHIAVVL 187

  Fly   183 VCSICVFYTMFGGIKAVVWTDVIQAAIMVASVVLVGVLGAHRVGG-----FFEVLRIAGEGGRLD 242
            |..:.:.|.:|||:.|..|..:|:|.:::.....:..:....||.     |.|.:.:..:|  :|
E. coli   188 VGVLMMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSEAMAVHPKG--VD 250

  Fly   243 INYNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFI----LI 303
            |.....| .:..|..:.....:|: |..|| ...:.|..::.....||:| |.:..||:    ::
E. coli   251 IMKPGGL-VKDPISALSLGLGLMF-GTAGL-PHILMRFFTVSDAREARKS-VFYATGFMGYFYIL 311

  Fly   304 MFFNCFTGIVIYS---RFHDCDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALST 365
            .|...|..|::..   .:.|.    :||:...:.|....:.:.||.     .:|:..:.:.|.:|
E. coli   312 TFIIGFGAIMLVGANPEYKDA----AGHLIGGNNMAAVHLANAVGG-----NLFLGFISAVAFAT 367

  Fly   366 LSASIN--SLGGV------VYFDYIKPHIRHTEHRANVIMKLFVFFTGIYCILGGMVIENFNSIL 422
            :.|.:.  :|.|.      :|.:..|...  ||.....:.|:.|...|:..|:.|::.||.|...
E. coli   368 ILAVVAGLTLAGASAVSHDLYANVFKKGA--TEREELRVSKITVLILGVIAIILGVLFENQNIAF 430

  Fly   423 QVIYSIGGMSF--GSTCG--VFMLGMLVPKSHGRAALVGVLASIACMATIVIL 471
            .|     |::|  .::|.  :.:|.|...|...|.|::|....:.....::||
E. coli   431 MV-----GLAFAIAASCNFPIILLSMYWSKLTTRGAMMGGWLGLITAVVLMIL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 92/490 (19%)
actPNP_418491.1 actP 1..549 CDD:236495 99/508 (19%)

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